Information for CAZyme ID: QHW31906.1
Basic Information
GenBank ID | QHW31906.1 |
Family | CBM46, GH5_4 |
Sequence Length | 666 |
UniProt ID | A0A6C0P102(100,100)![]() |
Average pLDDT? | 84.39 |
CAZy50 ID | 42894 |
CAZy50 Rep | Yes, QHW31906.1 |
Structure Cluster | SC_CBM46_clus5, SC_GH5_clus109 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2704463 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus rhizovicinus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKRLAPFILS LILCSFALLP MYAERAAAAP AAASTKKTPL QTTVDAMQPG WNLGNTFDAT | 60 |
GGDETAWGNP VVTKELIDSI AAAGFKSIRL PVTWQERLGT EPDYTIDPAF MSRIQEVVDW | 120 |
SLDAGLYVIV NIHHDSSWIM NMETQHDEVL ARFKAIWTQV AAHFKNYSEK LMFESVNEPR | 180 |
FSDDWNKDSP VYFEMLGELN TAFVHLVRAS GGHNAQRPLV LPTIAASAAQ SDRLEELLKT | 240 |
IESLKDKNLI ATFHYYGYWQ FSVNVAGVTT FANEAQTDLV NTFDRVYDTL SVKGIPVIVG | 300 |
EFGLLGFDKS LQTIEHGEVL KFFEYITYYA KEKGFPLMLW DNGQHFDRQN YKWSDEDLYD | 360 |
VIMEGMKSRS STAETDDVYM KANAAATDKR IPLNLNGNTF TALKNGDKTL VQGTDYELDG | 420 |
QDLILKAGLL QSLLTGTTGV NAILNCSFSA GADWKLNVIA YDTPLMQSTE GSDSFFSIPT | 480 |
QFGGDRLATM EATYAEGGNA GPNDWTSYQE FGLAFSPEYE NGHIEMKPDF LKTLKDGEEV | 540 |
TLNFHFGSGE IVPYKLKKQS SSVTGLSTQV DAPASGTANG ATNGATNNST NAPESEPAND | 600 |
KTSGSASAAA NAEPESKPAD AAPAVEVSQA ERHDHDQRNE VLMIAGGALL VFVVSGLLLM | 660 |
RRSKRF | 666 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.39 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKRLAPFILS LILCSFALLP MYAERAAAAP AAASTKKTPL QTTVDAMQPG WNLGNTFDAT | 60 |
GGDETAWGNP VVTKELIDSI AAAGFKSIRL PVTWQERLGT EPDYTIDPAF MSRIQEVVDW | 120 |
SLDAGLYVIV NIHHDSSWIM NMETQHDEVL ARFKAIWTQV AAHFKNYSEK LMFESVNEPR | 180 |
FSDDWNKDSP VYFEMLGELN TAFVHLVRAS GGHNAQRPLV LPTIAASAAQ SDRLEELLKT | 240 |
IESLKDKNLI ATFHYYGYWQ FSVNVAGVTT FANEAQTDLV NTFDRVYDTL SVKGIPVIVG | 300 |
EFGLLGFDKS LQTIEHGEVL KFFEYITYYA KEKGFPLMLW DNGQHFDRQN YKWSDEDLYD | 360 |
VIMEGMKSRS STAETDDVYM KANAAATDKR IPLNLNGNTF TALKNGDKTL VQGTDYELDG | 420 |
QDLILKAGLL QSLLTGTTGV NAILNCSFSA GADWKLNVIA YDTPLMQSTE GSDSFFSIPT | 480 |
QFGGDRLATM EATYAEGGNA GPNDWTSYQE FGLAFSPEYE NGHIEMKPDF LKTLKDGEEV | 540 |
TLNFHFGSGE IVPYKLKKQS SSVTGLSTQV DAPASGTANG ATNGATNNST NAPESEPAND | 600 |
KTSGSASAAA NAEPESKPAD AAPAVEVSQA ERHDHDQRNE VLMIAGGALL VFVVSGLLLM | 660 |
RRSKRF | 666 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.