Information for CAZyme ID: QHS61754.1
Basic Information
| GenBank ID | QHS61754.1 |
| Family | GH3 |
| Sequence Length | 1012 |
| UniProt ID | A0A6B9ZK34(100,100) |
| Average pLDDT? | 90.79 |
| CAZy50 ID | 13760 |
| CAZy50 Rep | Yes, QHS61754.1 |
| Structure Cluster | SC_GH3_clus93 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2703787 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga agri |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MMKQLTILGL SFLCLGGSVL MALPGKGPGP RLVKRNVPKE VSESTQIRKK ASFRQEDPAK | 60 |
| RWVDSVFESL NDEERIAQLI MIRAHSNLGA DHIRKVTKDI QDNKVGGLIF FQGGPVRQAN | 120 |
| LTNYYQSISK VPLMIAIDGE WGLGMRLDSV TALPRNLMLG AMQDSALAYD YGKQLAMQCK | 180 |
| RLGIHVDYAP DMDVNNNPNN PVINDRSFGQ DKFQVARMGI QVIKGMQDQN VMAVAKHFPG | 240 |
| HGDTDVDSHY DMPVIRKSRA ALDSLELYPF RRAIDAGVQS VMMAHLYVPA LDSTPNTPTS | 300 |
| ISHKAITDYL KGELGYKGIV ITDALEMKGI AKFYSKGEEA ARSLLAGNDM MMLPSTASGS | 360 |
| VDAIKRAIRR GDITWNEVNE RVKKVLLAKY KLGLNKPQFI DVNNLTADLN AGSDSLTKRI | 420 |
| AEQAITLVKN DNSLIPFTQH TPGKLAVIAV GADVNNAFVQ TIKTLRPDVN SFIFTARQPE | 480 |
| TQVAQVVERL KKDYQAVIIS LHNYSRRPFN NFGISSAERL LIQQLQQEMP SATVVFGNPY | 540 |
| AIQYFCEGPT IIAAYEDDPV TQQTAANMLF GQQPYKGKLP VTVCPNFPYG TGIVYTPPAP | 600 |
| VAQVKFELER VKPETVGMSS LALRKIDVLA NDMIAKGAAP GCQILAMKDG KIVYDKTFGS | 660 |
| FDYSTREPVT SSALYDLASV TKICATTIAV MRLYDEGKLS LDAKLGDYLP WVKGTDKAGL | 720 |
| RIRDILLHQA GLVAFIPFYK DVVDARGIPD TALFHTYADS VYAVRVAEHL YMKSSYVDTM | 780 |
| FQKILASPLK SPGSYIYSDN DFIFLGKIVE QITGKKLNRY VKETFYEPLG MTTAGFRPRE | 840 |
| RFQLSQLAPT ESEPIFRRQW IRGDVHDPGA AMFGGVAGHA GLFSNAEDLA LLMQMLLNGG | 900 |
| SLAGKEYIKP ETIQLFTAYS SNVSRRGLGF DKPEKNNGRK GEAYPAKSAS PLTYGHTGFT | 960 |
| GTCVWVDPQS QLLFIFLSNR VCSAGGENKK LITHHVRENI MEVLYEAMGG KK | 1012 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.79 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MMKQLTILGL SFLCLGGSVL MALPGKGPGP RLVKRNVPKE VSESTQIRKK ASFRQEDPAK | 60 |
| RWVDSVFESL NDEERIAQLI MIRAHSNLGA DHIRKVTKDI QDNKVGGLIF FQGGPVRQAN | 120 |
| LTNYYQSISK VPLMIAIDGE WGLGMRLDSV TALPRNLMLG AMQDSALAYD YGKQLAMQCK | 180 |
| RLGIHVDYAP DMDVNNNPNN PVINDRSFGQ DKFQVARMGI QVIKGMQDQN VMAVAKHFPG | 240 |
| HGDTDVDSHY DMPVIRKSRA ALDSLELYPF RRAIDAGVQS VMMAHLYVPA LDSTPNTPTS | 300 |
| ISHKAITDYL KGELGYKGIV ITDALEMKGI AKFYSKGEEA ARSLLAGNDM MMLPSTASGS | 360 |
| VDAIKRAIRR GDITWNEVNE RVKKVLLAKY KLGLNKPQFI DVNNLTADLN AGSDSLTKRI | 420 |
| AEQAITLVKN DNSLIPFTQH TPGKLAVIAV GADVNNAFVQ TIKTLRPDVN SFIFTARQPE | 480 |
| TQVAQVVERL KKDYQAVIIS LHNYSRRPFN NFGISSAERL LIQQLQQEMP SATVVFGNPY | 540 |
| AIQYFCEGPT IIAAYEDDPV TQQTAANMLF GQQPYKGKLP VTVCPNFPYG TGIVYTPPAP | 600 |
| VAQVKFELER VKPETVGMSS LALRKIDVLA NDMIAKGAAP GCQILAMKDG KIVYDKTFGS | 660 |
| FDYSTREPVT SSALYDLASV TKICATTIAV MRLYDEGKLS LDAKLGDYLP WVKGTDKAGL | 720 |
| RIRDILLHQA GLVAFIPFYK DVVDARGIPD TALFHTYADS VYAVRVAEHL YMKSSYVDTM | 780 |
| FQKILASPLK SPGSYIYSDN DFIFLGKIVE QITGKKLNRY VKETFYEPLG MTTAGFRPRE | 840 |
| RFQLSQLAPT ESEPIFRRQW IRGDVHDPGA AMFGGVAGHA GLFSNAEDLA LLMQMLLNGG | 900 |
| SLAGKEYIKP ETIQLFTAYS SNVSRRGLGF DKPEKNNGRK GEAYPAKSAS PLTYGHTGFT | 960 |
| GTCVWVDPQS QLLFIFLSNR VCSAGGENKK LITHHVRENI MEVLYEAMGG KK | 1012 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.