CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: QHO24732.1

Basic Information

GenBank IDQHO24732.1
FamilyCBM20
Sequence Length506
UniProt IDA0A445AKG0(96.0,99.0)Download
Average pLDDT?49.03
CAZy50 ID67590
CAZy50 RepYes, QHO24732.1
Structure ClusterSC_CBM20_clus10
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3818
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusArachis
SpeciesArachis hypogaea

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKALISSSCS  KAIVGSLGSH  IYHRRGGGGV  VAAHVPGRVE  FCFSLRSRND  KRGCSFWFLK60
TKGVTPIHSV  PPKTEVELEP  SKPDLETVEP  QVQKSEQTNE  SKFVHVTFQL  QKDCFFGEQF120
LLVGEDPMLG  SWDPLEGLPM  AWSDGHVWTA  NLDIPAGKSI  EYKFVLKRKA  GKIVWQPGMN180
RIINISENMN  RIIVSEDWEK  AELQEIIEED  QIAQSDEELQ  VVSETSNLAE  NSDIPKEELV240
SGLSEASDLE  ANQSQTHDAE  NPITEEPEVQ  KEPEVQKPSS  DSISYSTEMP  LAIVAENIGS300
FEDSSNNTSY  ENNLSNIQLN  EQSADGSTNG  HISIMHNLVD  NGNAEPLMNQ  EATVTESKLF360
ELERGPVLVP  GLELPFEEEG  PDVVVQERIT  METSSETFES  KDDEVQERTT  MITSSEAFEP420
MDQNKPEFSK  EQGSNNGATQ  EIIATIKDEP  RHHYNEHEQH  FHLAPSMEER  SNPQTHNDDD480
DGNVLQNDIQ  WGRETVKKFL  TKLGLI506

Predicted 3D structure by AlphaFold2 with pLDDT = 49.03 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MKALISSSCS  KAIVGSLGSH  IYHRRGGGGV  VAAHVPGRVE  FCFSLRSRND  KRGCSFWFLK60
TKGVTPIHSV  PPKTEVELEP  SKPDLETVEP  QVQKSEQTNE  SKFVHVTFQL  QKDCFFGEQF120
LLVGEDPMLG  SWDPLEGLPM  AWSDGHVWTA  NLDIPAGKSI  EYKFVLKRKA  GKIVWQPGMN180
RIINISENMN  RIIVSEDWEK  AELQEIIEED  QIAQSDEELQ  VVSETSNLAE  NSDIPKEELV240
SGLSEASDLE  ANQSQTHDAE  NPITEEPEVQ  KEPEVQKPSS  DSISYSTEMP  LAIVAENIGS300
FEDSSNNTSY  ENNLSNIQLN  EQSADGSTNG  HISIMHNLVD  NGNAEPLMNQ  EATVTESKLF360
ELERGPVLVP  GLELPFEEEG  PDVVVQERIT  METSSETFES  KDDEVQERTT  MITSSEAFEP420
MDQNKPEFSK  EQGSNNGATQ  EIIATIKDEP  RHHYNEHEQH  FHLAPSMEER  SNPQTHNDDD480
DGNVLQNDIQ  WGRETVKKFL  TKLGLI506

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM20(104-188)

MKALISSSCS  KAIVGSLGSH  IYHRRGGGGV  VAAHVPGRVE  FCFSLRSRND  KRGCSFWFLK60
TKGVTPIHSV  PPKTEVELEP  SKPDLETVEP  QVQKSEQTNE  SKFVHVTFQL  QKDCFFGEQF120
LLVGEDPMLG  SWDPLEGLPM  AWSDGHVWTA  NLDIPAGKSI  EYKFVLKRKA  GKIVWQPGMN180
RIINISENMN  RIIVSEDWEK  AELQEIIEED  QIAQSDEELQ  VVSETSNLAE  NSDIPKEELV240
SGLSEASDLE  ANQSQTHDAE  NPITEEPEVQ  KEPEVQKPSS  DSISYSTEMP  LAIVAENIGS300
FEDSSNNTSY  ENNLSNIQLN  EQSADGSTNG  HISIMHNLVD  NGNAEPLMNQ  EATVTESKLF360
ELERGPVLVP  GLELPFEEEG  PDVVVQERIT  METSSETFES  KDDEVQERTT  MITSSEAFEP420
MDQNKPEFSK  EQGSNNGATQ  EIIATIKDEP  RHHYNEHEQH  FHLAPSMEER  SNPQTHNDDD480
DEEPVEVEVE  GRTSLELIMS  CVIVMIHLPR  FLLSWERWIG  AQEVC525

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help