Information for CAZyme ID: QHN49998.1
Basic Information
| GenBank ID | QHN49998.1 |
| Family | CBM50 |
| Sequence Length | 640 |
| UniProt ID | A0A857MS96(100,100) |
| Average pLDDT? | 41.72 |
| CAZy50 ID | 46733 |
| CAZy50 Rep | Yes, QHN49998.1 |
| Structure Cluster | SC_CBM50_clus39 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1422 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Bacillaceae |
| Genus | Geobacillus |
| Species | Geobacillus stearothermophilus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKIHIVQKGD TLWKIAQKYG VDFEQLKKIN GHVSDPDMIM PGMKIKVPTA GVPVKKETKW | 60 |
| QAPPKKAKIE EHPYAEAKPF VSIDIDTEFG AVAPEGKTPA NDAPDNEAPK AAVKEAPKAP | 120 |
| DNEASKAVVK EAPKAPDNEA PKAVVKEAPK APDNEAPKEA VKEAPKAPDN EASKAVVKEA | 180 |
| PKAPDNEASK AVVKEAPKAP DNEAPKEAVK EAPKAPDNEA PKEAVKEAPK APDNEAPKAA | 240 |
| VKEAPKAPDN EAPKAAVKEA PKAPDNEAPK AAVKEAPKAP VSEAPKAAVK EAPKAPDNEA | 300 |
| PKAAVKEAPK ASVSEAPKAA GKAPVSETPK ATGKEELKVP VNETPNAPVN ETPNVPVNEA | 360 |
| PNAANAEGAK TPTVEPPFVH TIPPAAASSH VSFAKSLSNL PPIPPKPSNI LPGIMKEETG | 420 |
| ESPDKLKGEQ MEPESDEAPP LPNIPYVPVA PPPAPAFGSD QGCVPVTPIL PGPGFYVPPL | 480 |
| PAMPPYSPLP NPPAGESPES GAAPYPGISE SSSESAESPP LLGPGGHGAA IPPAPPAGAA | 540 |
| FASPGYAPPG VYAPPAGYPP VAYMPVYSPV PHYGGYAPPG MYVPPAPYGY APQQAAPLPW | 600 |
| PGVVYPTSPP GYAPSPAPPA ASPRLFAGPP DEESEHGEEQ | 640 |
Predicted 3D structure by AlphaFold2 with pLDDT = 41.72 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKIHIVQKGD TLWKIAQKYG VDFEQLKKIN GHVSDPDMIM PGMKIKVPTA GVPVKKETKW | 60 |
| QAPPKKAKIE EHPYAEAKPF VSIDIDTEFG AVAPEGKTPA NDAPDNEAPK AAVKEAPKAP | 120 |
| DNEASKAVVK EAPKAPDNEA PKAVVKEAPK APDNEAPKEA VKEAPKAPDN EASKAVVKEA | 180 |
| PKAPDNEASK AVVKEAPKAP DNEAPKEAVK EAPKAPDNEA PKEAVKEAPK APDNEAPKAA | 240 |
| VKEAPKAPDN EAPKAAVKEA PKAPDNEAPK AAVKEAPKAP VSEAPKAAVK EAPKAPDNEA | 300 |
| PKAAVKEAPK ASVSEAPKAA GKAPVSETPK ATGKEELKVP VNETPNAPVN ETPNVPVNEA | 360 |
| PNAANAEGAK TPTVEPPFVH TIPPAAASSH VSFAKSLSNL PPIPPKPSNI LPGIMKEETG | 420 |
| ESPDKLKGEQ MEPESDEAPP LPNIPYVPVA PPPAPAFGSD QGCVPVTPIL PGPGFYVPPL | 480 |
| PAMPPYSPLP NPPAGESPES GAAPYPGISE SSSESAESPP LLGPGGHGAA IPPAPPAGAA | 540 |
| FASPGYAPPG VYAPPAGYPP VAYMPVYSPV PHYGGYAPPG MYVPPAPYGY APQQAAPLPW | 600 |
| PGVVYPTSPP GYAPSPAPPA ASPRLFAGPP DEESEHGEEQ | 640 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.