Information for CAZyme ID: QHN03243.1
Basic Information
| GenBank ID | QHN03243.1 |
| Family | GH42 |
| Sequence Length | 758 |
| UniProt ID | A0A7L5A7E2(100,100) |
| Average pLDDT? | 89.57 |
| CAZy50 ID | 31891 |
| CAZy50 Rep | Yes, QHN03243.1 |
| Structure Cluster | SC_GH42_clus31 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2602070 |
| Kingdom | Bacteria |
| Phylum | Acidobacteriota |
| Class | Terriglobia |
| Order | Terriglobales |
| Family | Acidobacteriaceae |
| Genus | Granulicella |
| Species | Granulicella sp. WH15 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPSHDRREIT MSDNNEVTRR DFLLSTAMIT ASSAVGHTQP LLGALVGQDT ASTVVMPSTE | 60 |
| VNMGSVFPSG GVYFRKSNPP TDEWARDHQT ASQLGMNTFR HWFMWSALEV APGKWDWADY | 120 |
| DTMMDLAAKN GIKVIIATLD TAAPEWAFRK YPHARYKASD DSITHSSVSA SSGIGGFPGL | 180 |
| CLDNADVKAL AENFHTKLIE HYRGHPALLG YDLWNETTYD SGRIGKMNCF CEASQKKLQE | 240 |
| WLKDKYGSLD AVCKTWHRPS FSEWADIEPP HDFSGYPESL DWLQHRIDKA YEHFDWRIAL | 300 |
| YRRLDPKHLV TCHGVAGTLE SHASASHNEW MAAKRVDVYG LTWVQSRHGT EPWRQWQSFD | 360 |
| LVRAGARGKP FWHAEAQGGP LWMQPQLIGK PREDGRVTEP EDIRIWNMIS FAGGARGLLY | 420 |
| CRYRPLLDGP LFGAFGSIGM DGSVTPRAQM AGKTLTWANA HPEIWKSRPV RGDVGLLFIP | 480 |
| EAELFNYVQQ LSTDFYLESM RGAYQAFFDQ NIQPDFVALD NIDEYKLIYL AYPVMMKPET | 540 |
| VAKLKDYVSK GGTLISEGLP AYFGEHGHVG EVQPNYGLDE VFGARESYVE FLADIHDNLM | 600 |
| MEVNGNNIHG RYFFQQYEVK GGKAAGHYPN GSVAAVENQM GRGRTLLMGS FPGSGYYLHH | 660 |
| DKPTLTLFAG FLKMASIVPR VKVNDNEVQV RVHQGEGGTN LWVTNPTRTD RSVSVSLSSD | 720 |
| LGRFSTGEDK WGKLDIKVSG QQVTVNVPAR DAAVISLR | 758 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.57 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MPSHDRREIT MSDNNEVTRR DFLLSTAMIT ASSAVGHTQP LLGALVGQDT ASTVVMPSTE | 60 |
| VNMGSVFPSG GVYFRKSNPP TDEWARDHQT ASQLGMNTFR HWFMWSALEV APGKWDWADY | 120 |
| DTMMDLAAKN GIKVIIATLD TAAPEWAFRK YPHARYKASD DSITHSSVSA SSGIGGFPGL | 180 |
| CLDNADVKAL AENFHTKLIE HYRGHPALLG YDLWNETTYD SGRIGKMNCF CEASQKKLQE | 240 |
| WLKDKYGSLD AVCKTWHRPS FSEWADIEPP HDFSGYPESL DWLQHRIDKA YEHFDWRIAL | 300 |
| YRRLDPKHLV TCHGVAGTLE SHASASHNEW MAAKRVDVYG LTWVQSRHGT EPWRQWQSFD | 360 |
| LVRAGARGKP FWHAEAQGGP LWMQPQLIGK PREDGRVTEP EDIRIWNMIS FAGGARGLLY | 420 |
| CRYRPLLDGP LFGAFGSIGM DGSVTPRAQM AGKTLTWANA HPEIWKSRPV RGDVGLLFIP | 480 |
| EAELFNYVQQ LSTDFYLESM RGAYQAFFDQ NIQPDFVALD NIDEYKLIYL AYPVMMKPET | 540 |
| VAKLKDYVSK GGTLISEGLP AYFGEHGHVG EVQPNYGLDE VFGARESYVE FLADIHDNLM | 600 |
| MEVNGNNIHG RYFFQQYEVK GGKAAGHYPN GSVAAVENQM GRGRTLLMGS FPGSGYYLHH | 660 |
| DKPTLTLFAG FLKMASIVPR VKVNDNEVQV RVHQGEGGTN LWVTNPTRTD RSVSVSLSSD | 720 |
| LGRFSTGEDK WGKLDIKVSG QQVTVNVPAR DAAVISLR | 758 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.