Information for CAZyme ID: QGQ94798.1
Basic Information
GenBank ID | QGQ94798.1 |
Family | CBM27, GH5_7 |
Sequence Length | 1405 |
UniProt ID | A0A6B8RHD4(100,100)![]() |
Average pLDDT? | 84.02 |
CAZy50 ID | 4864 |
CAZy50 Rep | Yes, QGQ94798.1 |
Structure Cluster | SC_CBM27_clus8, SC_GH5_clus153 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1778678 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus psychroresistens |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSMLFKKSLS LALCLILMLG VFTFNLSVVN ASGASGTYPT QDLEYNFNDG TTMSWDKDWG | 60 |
DPLVSLEHST FMSDGNNTGA LAAHVNFTGG GFDNGNIGGW LGSSQEVVDL TQYKSIEYDL | 120 |
FIHEPDNLLG VLKVETALNG GLYEDLNDWS EFNLAALNKV TINGKVYGKI HKKVSLKNAI | 180 |
NKALNKKLTI RLAGAGVQYD GIIYVDNVVI HKTNNIVYDF NDGTAMNWIP AWGDALGTVT | 240 |
NSTNQGNLNE GRLMVNTAFS SGGWKEANVK TILSGNSAVK TDLSNFGKIE YDVLIPNPTG | 300 |
FTGLLKVAAA FNDPWGDISS FETYDVTNQA TVEINGITYA KIHMVNSLTA IANKSAVGEL | 360 |
VIRLASDNSS YTGPIYLDNI TVFALEDTSI NIDSPTPFQD LAGNVSIVCT VATPELVSAS | 420 |
SVTVITATNH VISLALNANG KYEGTWNASL EPEGFMKLTA NLIASDNSTA IKQTEVYIKN | 480 |
SKIEVDIVSP TLASAVSNTY EIKASVTNGD ANPINSVELE VYGSEAVKYY KTDMSLNNGF | 540 |
YKANLDSTAF TDGAYVLKIN AKTANHTTSA TTEIIIHNGS GVGSIVAKHG TQFSLDNKTF | 600 |
YFNGWNAYDL SYKDDVTKNS NDKAIIYTAD GEKIELLIKK NSVVSYKEQI DRNILEAKKL | 660 |
GATVLRTWGY NTENGNTHSF YNSDWTFNED QFKEFDYVME SARRNGIKVI ITLSNYWDDL | 720 |
GGIKKYTEHL GLSSKLKFFT EPSAKDLFKA YIDKFTSRVN TLTNIKYSDD PTIFAWDLMN | 780 |
EPRMDKNEDN TADKSLYDPN GQKLGAWINE MTTYTKTKDS NHMVTVGAES HGYRNPAANN | 840 |
EPWARTDEGF GDDPISVLNQ PDVDFLTFHP YPNANWLRYT RDQTRALIQG IVNDGHAINK | 900 |
PVVMEEWNIQ RNEAVRDPAN GDATVEITDA SYPAVRLELY KDLLKTFREA GGDGSNFWSI | 960 |
LVNEADAGFS QTSYNPAYAV ENDRLLNLAY LDESKLMNAK TGLNLSSSPG TPTPTPAPTS | 1020 |
TPTAAVIDIS HTSNNGSQFG RNDSDQHKRY QTFIATGMPK VTAVDLRLKK IGTASNLTVE | 1080 |
LFATSGGKPT GTALASAQLT ANAVSASFAA VNVPISYAGL VSGVKYAVVL GQLTVSNADY | 1140 |
YEWAVENVNS ALEFGMYSGT TWLDNSNSGD GSTKIYVASV ATPTPTPTPT PTPTPTPTPT | 1200 |
PTAIPAVITL STEKAIVNTG ESLVLTVKAS HVTNLKGFDL QVSYDKTLFE LTAASLDGEF | 1260 |
VNAVNNETGF LDYSDDRVNG KVQVIGALLG NAFKSGDVKF LKLTFMAKTN VDAKTGFTIL | 1320 |
NQSSLSDKNG VISPTVTDIQ KELVIANPDV DHSNTVNISD LIAVANLFMK ISTDTGYLAI | 1380 |
CDLNKDGIIN IFDIAYVGKV ILHKN | 1405 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.02 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MSMLFKKSLS LALCLILMLG VFTFNLSVVN ASGASGTYPT QDLEYNFNDG TTMSWDKDWG | 60 |
DPLVSLEHST FMSDGNNTGA LAAHVNFTGG GFDNGNIGGW LGSSQEVVDL TQYKSIEYDL | 120 |
FIHEPDNLLG VLKVETALNG GLYEDLNDWS EFNLAALNKV TINGKVYGKI HKKVSLKNAI | 180 |
NKALNKKLTI RLAGAGVQYD GIIYVDNVVI HKTNNIVYDF NDGTAMNWIP AWGDALGTVT | 240 |
NSTNQGNLNE GRLMVNTAFS SGGWKEANVK TILSGNSAVK TDLSNFGKIE YDVLIPNPTG | 300 |
FTGLLKVAAA FNDPWGDISS FETYDVTNQA TVEINGITYA KIHMVNSLTA IANKSAVGEL | 360 |
VIRLASDNSS YTGPIYLDNI TVFALEDTSI NIDSPTPFQD LAGNVSIVCT VATPELVSAS | 420 |
SVTVITATNH VISLALNANG KYEGTWNASL EPEGFMKLTA NLIASDNSTA IKQTEVYIKN | 480 |
SKIEVDIVSP TLASAVSNTY EIKASVTNGD ANPINSVELE VYGSEAVKYY KTDMSLNNGF | 540 |
YKANLDSTAF TDGAYVLKIN AKTANHTTSA TTEIIIHNGS GVGSIVAKHG TQFSLDNKTF | 600 |
YFNGWNAYDL SYKDDVTKNS NDKAIIYTAD GEKIELLIKK NSVVSYKEQI DRNILEAKKL | 660 |
GATVLRTWGY NTENGNTHSF YNSDWTFNED QFKEFDYVME SARRNGIKVI ITLSNYWDDL | 720 |
GGIKKYTEHL GLSSKLKFFT EPSAKDLFKA YIDKFTSRVN TLTNIKYSDD PTIFAWDLMN | 780 |
EPRMDKNEDN TADKSLYDPN GQKLGAWINE MTTYTKTKDS NHMVTVGAES HGYRNPAANN | 840 |
EPWARTDEGF GDDPISVLNQ PDVDFLTFHP YPNANWLRYT RDQTRALIQG IVNDGHAINK | 900 |
PVVMEEWNIQ RNEAVRDPAN GDATVEITDA SYPAVRLELY KDLLKTFREA GGDGSNFWSI | 960 |
LVNEADAGFS QTSYNPAYAV ENDRLLNLAY LDESKLMNAK TGLNLSSSPG TPTPTPAPTS | 1020 |
TPTAAVIDIS HTSNNGSQFG RNDSDQHKRY QTFIATGMPK VTAVDLRLKK IGTASNLTVE | 1080 |
LFATSGGKPT GTALASAQLT ANAVSASFAA VNVPISYAGL VSGVKYAVVL GQLTVSNADY | 1140 |
YEWAVENVNS ALEFGMYSGT TWLDNSNSGD GSTKIYVASV ATPTPTPTPT PTPTPTPTPT | 1200 |
PTAIPAVITL STEKAIVNTG ESLVLTVKAS HVTNLKGFDL QVSYDKTLFE LTAASLDGEF | 1260 |
VNAVNNETGF LDYSDDRVNG KVQVIGALLG NAFKSGDVKF LKLTFMAKTN VDAKTGFTIL | 1320 |
NQSSLSDKNG VISPTVTDIQ KELVIANPDV DHSNTVNISD LIAVANLFMK ISTDTGYLAI | 1380 |
CDLNKDGIIN IFDIAYVGKV ILHKN | 1405 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.