Information for CAZyme ID: QGN08121.1
Basic Information
GenBank ID | QGN08121.1 |
Family | CBM6, GH81 |
Sequence Length | 1245 |
UniProt ID | A0A650A705(100,100)![]() |
Average pLDDT? | 85.87 |
CAZy50 ID | 7019 |
CAZy50 Rep | Yes, QGN08121.1 |
Structure Cluster | SC_CBM6_clus32, SC_GH81_clus10 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1380432 |
Kingdom | Archaea |
Phylum | Euryarchaeota |
Class | Halobacteria |
Order | Halobacteriales |
Family | Haloarculaceae |
Genus | Halorhabdus |
Species | Halorhabdus sp. CBA1104 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSDNTDTPSL DLSRRTFVKG VGAAGAAGAT AGTVAAEVND DDVVSVGSGS FTTAIPAGYD | 60 |
YPSPPTPEYV TENVSPPIPT NDWWSGLLFG TFSSGPVIGL PYYSDPGENG LTIKHPTAWA | 120 |
GDPAEQDTIV ADWDNTPGLV VGHQRVDEFE DARVNDWGDW HVQTRLGATA NMWVDVTQAR | 180 |
GSPFLFAECI GGPAELTLTD AADEPAQDEQ VSVFADQGNV LGVTVEGEHY DQHFGIFAPS | 240 |
SASWEGLGTA TLTSGLGDGT SLTVAVLPEA STDLLSTFEE YAYNHVVGTT IDWEYVQTDD | 300 |
EGNPVSEVRT TYSFETEAKP ESTAEGTLTA LFPHQWKYAE EPFADVTYWS PRGEMKVKTG | 360 |
TSFTTAHTYQ GILPFEPTDG TQDMAQLESY VTGLMEDNDR YEWPAPHSAY WVGKDFYRNS | 420 |
VVAPIAQQTG QTEAQEYFTT AVTDRLEAWL TAGDTSMGTE AGQELFYYDD ALGSLFEYPT | 480 |
DFGSVAAITD HHFHYGYFVY GAAEAARTNP EWASEDNWGG MVNRLIRDYA NWERPDHDAA | 540 |
LDPAGDPKNA FPFLRNFDVY GGHSWAGGTV GNPKGNNQES SSEAVMAYAA MIRWGEMTGD | 600 |
DALRDAGIFL YTQETASVWD YWFDPEDDSL PDDWGANFDS FGTAGPDFEY ASNVWGGGYW | 660 |
RSLWWAASDP IEVFGINWLP IGGHSFYLGH DTTYANANWQ ALLDARDRHL DGENPETGFL | 720 |
GGFEPTAWGY RAMSNPSEAA SLVDEALPVG PGGNSSPFIY NFVHFIEGAG LVDTDVVGDV | 780 |
PFHQVFEDGE TRTYVAYNAD SAEITASFSD GMELSVPAGE IVVESTAEHY EPDTAAPSTP | 840 |
SNLEATMTNS YATELAWDGS TDPSGIQYYA VYLDGEEYTT VGAPEVRIDE LSRGTDYTIA | 900 |
VEAVDPFGNA SPQATIDVTT DSEDTAPPNA PRNPQTGSPS KTSIDLSWEA ASDVGEGSGI | 960 |
DHYAVLVDGQ EYTTTAETSV ALDDLDPGTK YTFGVVAVDG AGNESRPVTV DAQTVAEGAT | 1020 |
QRPFQGERRQ IPGKIEAEHF DQGGEGVSYH ETSDVNQAGA DYRDGPVDIG DAGGGNYTIG | 1080 |
YIPEGEWLEY SVTVESTAEY DIIVSVASAE GGGPIHIEVD GEDVTGQIDV PNTGSWTGYT | 1140 |
TVTGAKGVQL AGGDHVVRVV ADGGAWNFDW MRFDGGGEET PTETATPTAT ETATETPESP | 1200 |
QQQSKTEPEP TATTTSGPGF TVVSMILGLF GLSAYLLHND DDETL | 1245 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.87 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MSDNTDTPSL DLSRRTFVKG VGAAGAAGAT AGTVAAEVND DDVVSVGSGS FTTAIPAGYD | 60 |
YPSPPTPEYV TENVSPPIPT NDWWSGLLFG TFSSGPVIGL PYYSDPGENG LTIKHPTAWA | 120 |
GDPAEQDTIV ADWDNTPGLV VGHQRVDEFE DARVNDWGDW HVQTRLGATA NMWVDVTQAR | 180 |
GSPFLFAECI GGPAELTLTD AADEPAQDEQ VSVFADQGNV LGVTVEGEHY DQHFGIFAPS | 240 |
SASWEGLGTA TLTSGLGDGT SLTVAVLPEA STDLLSTFEE YAYNHVVGTT IDWEYVQTDD | 300 |
EGNPVSEVRT TYSFETEAKP ESTAEGTLTA LFPHQWKYAE EPFADVTYWS PRGEMKVKTG | 360 |
TSFTTAHTYQ GILPFEPTDG TQDMAQLESY VTGLMEDNDR YEWPAPHSAY WVGKDFYRNS | 420 |
VVAPIAQQTG QTEAQEYFTT AVTDRLEAWL TAGDTSMGTE AGQELFYYDD ALGSLFEYPT | 480 |
DFGSVAAITD HHFHYGYFVY GAAEAARTNP EWASEDNWGG MVNRLIRDYA NWERPDHDAA | 540 |
LDPAGDPKNA FPFLRNFDVY GGHSWAGGTV GNPKGNNQES SSEAVMAYAA MIRWGEMTGD | 600 |
DALRDAGIFL YTQETASVWD YWFDPEDDSL PDDWGANFDS FGTAGPDFEY ASNVWGGGYW | 660 |
RSLWWAASDP IEVFGINWLP IGGHSFYLGH DTTYANANWQ ALLDARDRHL DGENPETGFL | 720 |
GGFEPTAWGY RAMSNPSEAA SLVDEALPVG PGGNSSPFIY NFVHFIEGAG LVDTDVVGDV | 780 |
PFHQVFEDGE TRTYVAYNAD SAEITASFSD GMELSVPAGE IVVESTAEHY EPDTAAPSTP | 840 |
SNLEATMTNS YATELAWDGS TDPSGIQYYA VYLDGEEYTT VGAPEVRIDE LSRGTDYTIA | 900 |
VEAVDPFGNA SPQATIDVTT DSEDTAPPNA PRNPQTGSPS KTSIDLSWEA ASDVGEGSGI | 960 |
DHYAVLVDGQ EYTTTAETSV ALDDLDPGTK YTFGVVAVDG AGNESRPVTV DAQTVAEGAT | 1020 |
QRPFQGERRQ IPGKIEAEHF DQGGEGVSYH ETSDVNQAGA DYRDGPVDIG DAGGGNYTIG | 1080 |
YIPEGEWLEY SVTVESTAEY DIIVSVASAE GGGPIHIEVD GEDVTGQIDV PNTGSWTGYT | 1140 |
TVTGAKGVQL AGGDHVVRVV ADGGAWNFDW MRFDGGGEET PTETATPTAT ETATETPESP | 1200 |
QQQSKTEPEP TATTTSGPGF TVVSMILGLF GLSAYLLHND DDETL | 1245 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.