Information for CAZyme ID: QEJ89697.1
Basic Information
| GenBank ID | QEJ89697.1 |
| Family | GT107 |
| Sequence Length | 715 |
| UniProt ID | Q9X5N7(100,100) |
| Average pLDDT? | 85.95 |
| CAZy50 ID | 36766 |
| CAZy50 Rep | Yes, QEJ89697.1 |
| Structure Cluster | SC_GT107_clus30 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 562 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MYLYTGSKGI LARKNNIEPM LGHPLLYMKG DEAFSKNDVL VGWGKKSNTK QIKQKAQELG | 60 |
| ISYWQLEDGF IGYIGHPAKG GKAVSLIADP LGIYYDAHQT SQLEQLIIEP VDTALLARAE | 120 |
| HLISDILRLG ITKYNCYTNS TEHTFNGSVR ATDGPSLDLP THIQPELFTL TAHSNLARLL | 180 |
| DDPRPRILLV DQVAGDLSIS GALACEADFV SMVVEARRNH PNARLLLRTH PDTRFSKKSG | 240 |
| VLARLVGRDP RLADVEVVSE PCHPHRIIRM VDAVYTVSSQ VGFEALLLGK PVYCFGMPFY | 300 |
| AGWGLTHDSK RCIRREEAMS AEGVSSISLP RLVAAALIRY PRYLDPILGK RCEVEDVVAI | 360 |
| LAQQQVEPKP WRRLYLVGFS LWKRAFIRTF CAYLADELCF VRTVPSQLKD DEQVLVWGNR | 420 |
| YPELQSVIRI EDGFIRSNGL GSNLCRPSSL SIDPVGIYFD SRRPSKLEQL LTTYVLDAKE | 480 |
| EARAESLLAQ LQSSRVSKYN VGSTQEYEPP NDGRELILVV GQVDGDASIL CGSPIIRSNE | 540 |
| QLLWAVREAK PNAHILFKPH PDVVSGNRKG TISARCLAHC VDSQVSDIRL ESLYPHINEL | 600 |
| HTMTSLSGFE ALVQGVKVTT WGQPFYSGWG LTQDKHPSER RHRTLTLSAL AYITLVKYPR | 660 |
| YIDWKSGLWC SPEQLIHLLS TQKKATTAGV KWWQRWRIKL VSFAQTLRLF RSLLP | 715 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.95 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MYLYTGSKGI LARKNNIEPM LGHPLLYMKG DEAFSKNDVL VGWGKKSNTK QIKQKAQELG | 60 |
| ISYWQLEDGF IGYIGHPAKG GKAVSLIADP LGIYYDAHQT SQLEQLIIEP VDTALLARAE | 120 |
| HLISDILRLG ITKYNCYTNS TEHTFNGSVR ATDGPSLDLP THIQPELFTL TAHSNLARLL | 180 |
| DDPRPRILLV DQVAGDLSIS GALACEADFV SMVVEARRNH PNARLLLRTH PDTRFSKKSG | 240 |
| VLARLVGRDP RLADVEVVSE PCHPHRIIRM VDAVYTVSSQ VGFEALLLGK PVYCFGMPFY | 300 |
| AGWGLTHDSK RCIRREEAMS AEGVSSISLP RLVAAALIRY PRYLDPILGK RCEVEDVVAI | 360 |
| LAQQQVEPKP WRRLYLVGFS LWKRAFIRTF CAYLADELCF VRTVPSQLKD DEQVLVWGNR | 420 |
| YPELQSVIRI EDGFIRSNGL GSNLCRPSSL SIDPVGIYFD SRRPSKLEQL LTTYVLDAKE | 480 |
| EARAESLLAQ LQSSRVSKYN VGSTQEYEPP NDGRELILVV GQVDGDASIL CGSPIIRSNE | 540 |
| QLLWAVREAK PNAHILFKPH PDVVSGNRKG TISARCLAHC VDSQVSDIRL ESLYPHINEL | 600 |
| HTMTSLSGFE ALVQGVKVTT WGQPFYSGWG LTQDKHPSER RHRTLTLSAL AYITLVKYPR | 660 |
| YIDWKSGLWC SPEQLIHLLS TQKKATTAGV KWWQRWRIKL VSFAQTLRLF RSLLP | 715 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.