Information for CAZyme ID: QEH32172.1
Basic Information
GenBank ID | QEH32172.1 |
Family | GH5_25 |
Sequence Length | 569 |
UniProt ID | A0A5B9VVB3(100,100)![]() |
Average pLDDT? | 90.14 |
CAZy50 ID | 56737 |
CAZy50 Rep | Yes, QEH32172.1 |
Structure Cluster | SC_GH5_clus299 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 406548 |
Kingdom | Bacteria |
Phylum | Planctomycetota |
Class | Planctomycetia |
Order | Isosphaerales |
Family | Isosphaeraceae |
Genus | Aquisphaera |
Species | Aquisphaera giovannonii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTYSLGWTRP IRWAGLAAIL ALPLAARGAG PAKLAAGARF DLRADAAVGT IDGGRVVQGT | 60 |
GTIDRPNWLK GREQAAAYSV NFPISRLGWR ELAVRFTPEG TGNVSVTLMG PWEQASPGVL | 120 |
YREEAFWDGL NVDGATLEGG GFEPPSAASA WQSGGGSIIR KAADAPALEG SHLARTWHNA | 180 |
TLTANLAVRA GTPVTVLVHA RAVTPEGFRE MKRIAGHDTP AHRAALKFRR GANLGNGLEV | 240 |
APSQDWGVKY TAEDIRHIKA EGFDHIRIPI GWHHYTGPAP SYTLRPEIFR KVDFFVNEAA | 300 |
REKLNVLINI HHFDDFTTDP KGQAARFLAI WEQVAAHYAK APDGLAFELL NEPKDAATTE | 360 |
VINPIFAKAV RAIRKTNPHR TIVYGPGKWN GIEELPALML PDDDRNLIAT VHCYDPFRFT | 420 |
HQGASWTGNG PDSKVVGIVF PGPPRTPLEP DSSLDLSRGF RDWLHAYNTE PAGSNPCGPE | 480 |
VMDLAVTRIK EWSDYYGRPV YLGEFGAYTR ADPASRANYY GLFRRRLEAA NIGWALWDWH | 540 |
AGFNYWDPKA NAPEPGMHDA LFGGAKAGR | 569 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.14 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MTYSLGWTRP IRWAGLAAIL ALPLAARGAG PAKLAAGARF DLRADAAVGT IDGGRVVQGT | 60 |
GTIDRPNWLK GREQAAAYSV NFPISRLGWR ELAVRFTPEG TGNVSVTLMG PWEQASPGVL | 120 |
YREEAFWDGL NVDGATLEGG GFEPPSAASA WQSGGGSIIR KAADAPALEG SHLARTWHNA | 180 |
TLTANLAVRA GTPVTVLVHA RAVTPEGFRE MKRIAGHDTP AHRAALKFRR GANLGNGLEV | 240 |
APSQDWGVKY TAEDIRHIKA EGFDHIRIPI GWHHYTGPAP SYTLRPEIFR KVDFFVNEAA | 300 |
REKLNVLINI HHFDDFTTDP KGQAARFLAI WEQVAAHYAK APDGLAFELL NEPKDAATTE | 360 |
VINPIFAKAV RAIRKTNPHR TIVYGPGKWN GIEELPALML PDDDRNLIAT VHCYDPFRFT | 420 |
HQGASWTGNG PDSKVVGIVF PGPPRTPLEP DSSLDLSRGF RDWLHAYNTE PAGSNPCGPE | 480 |
VMDLAVTRIK EWSDYYGRPV YLGEFGAYTR ADPASRANYY GLFRRRLEAA NIGWALWDWH | 540 |
AGFNYWDPKA NAPEPGMHDA LFGGAKAGR | 569 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.