CAZyme3D

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Entry ID

Information for CAZyme ID: QEG00462.1

Basic Information

GenBank IDQEG00462.1
FamilyPL10_1
Sequence Length364
UniProt IDA0A5B9MGR0(100,100)Download
Average pLDDT?91.81
CAZy50 ID29331
CAZy50 RepNo, QDV61570.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2795974
KingdomBacteria
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPirellulales
FamilyPirellulaceae
GenusStieleria
SpeciesStieleria maiorica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKSYQNSFGI  DGLWYLAICL  TPLFLGGDAV  AQVSFSKNLL  KKDDAWFRSE  EAGAIADSVM60
EYQSPQGGWP  KSADLAKRPR  SPSEIPQPGD  SRANSLDNDA  TTVPMQFLAR  MAHATSDAKY120
RDSFLRGVDY  LLAAQYDNGG  WPQFWPLRKG  YYSHITYNDG  AMVRVMEVLR  DVAAGDAPYD180
FVDAERRERA  GQALERGIDC  ILKTQIRQNG  KRTAWCAQHD  AKSLQPAWAR  AYEPPSLSGS240
ESIGVVRFLM  KIEAPSDEII  ASVEGAVEWV  RDVQLNGWRV  ESFKNRDGRS  DRRLVADPDA300
PPLWARFYEL  ETNRPLYLDR  DSVFRYDYSE  LSHERRNGYS  YLGNWGQSLL  EKDYPRWREK360
RERD364

Predicted 3D structure by AlphaFold2 with pLDDT = 91.81 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL10_1(63-349)

MKSYQNSFGI  DGLWYLAICL  TPLFLGGDAV  AQVSFSKNLL  KKDDAWFRSE  EAGAIADSVM60
EYQSPQGGWP  KSADLAKRPR  SPSEIPQPGD  SRANSLDNDA  TTVPMQFLAR  MAHATSDAKY120
RDSFLRGVDY  LLAAQYDNGG  WPQFWPLRKG  YYSHITYNDG  AMVRVMEVLR  DVAAGDAPYD180
FVDAERRERA  GQALERGIDC  ILKTQIRQNG  KRTAWCAQHD  AKSLQPAWAR  AYEPPSLSGS240
ESIGVVRFLM  KIEAPSDEII  ASVEGAVEWV  RDVQLNGWRV  ESFKNRDGRS  DRRLVADPDA300
PPLWARFYEL  ETNRPLYLDR  DSVFRYDYSE  LSHERRNGYS  YLGNWGQSLL  EKDYPRWREK360
RERD364

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help