Information for CAZyme ID: QDV61570.1
Basic Information
GenBank ID | QDV61570.1 |
Family | PL10_1 |
Sequence Length | 781 |
UniProt ID | A0A5C6FLX5(94.6,100)![]() |
Average pLDDT? | 89.66 |
CAZy50 ID | 29331 |
CAZy50 Rep | Yes, QDV61570.1 |
Structure Cluster | SC_PL10_clus14 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2527996 |
Kingdom | Bacteria |
Phylum | Planctomycetota |
Class | Planctomycetia |
Order | Planctomycetales |
Family | Planctomycetaceae |
Genus | Crateriforma |
Species | Crateriforma conspicua |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLHRRHLHVL QWCLSAILIL IVAGKSADAQ IRFDKNLLRN DDAWFQSDVA REVADNVIQY | 60 |
QSPQGGWPKS TDLAKPPRSP DDIPRPGDGR ANSLDNDATT VPMQFLARMA HETGDIRYRD | 120 |
SFLKGVDYLL AAQYPGGGWP QFWPLRKGYY SHITFNDGAM IRVMHLLRDV ADGEAPYGFV | 180 |
DGMRRRKAAE AVRIGIECIL KCQVVFDGVP TVWCAQHDVK TLAPAQARSY EHPSLSGSES | 240 |
AGVLIFLMSV SDPTPEMMRA VQAGVEWFDS VKIEGYRYNK SQTGLALTKD QQAGPLWARF | 300 |
YEIKSNRPIF SDRDGVIKYD IQEIGDERRG GYSWYGNWGQ KVAQKYAQWP HREGAKKRLR | 360 |
SRSRRIPEHS GASGYRCRVI VSTDIGGTDP DDFQSMVHLL VYSDLLDLEG LVSSPYGEGR | 420 |
MKDILDVIDC YEQDYECLSS YSDKYPNPDI LRAITKQGEI ERAPYAGVRR PTEGSRWIID | 480 |
CAHRDDPRPL YLLVWGGLED VAQALNDAPE ILPKLRVYWI GGPNKKWSPD AYQYVVDHHP | 540 |
TLWMIESNAT YRGWYTGGDQ SGVWGNEQFV SEHIKGIGAL GNFFVRQKAD IKMGDTPSVG | 600 |
WLLNGRLEDP SHPGWGGRYV RAWKRPNLKL NRLPKESDRF QVFGILELVI PAGDAPPDAK | 660 |
ATLIVENQRL IGHLADDRTM RFRFCPKAAK QYSFQLESTV ASLDGLRGAI TACAPEPSVA | 720 |
ARPDTRLPNW WTDDLAPSLA EGPHSGAKTV SRWRESYLSD FAGRILRCQR PVPVNSAELA | 780 |
P | 781 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.66 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MLHRRHLHVL QWCLSAILIL IVAGKSADAQ IRFDKNLLRN DDAWFQSDVA REVADNVIQY | 60 |
QSPQGGWPKS TDLAKPPRSP DDIPRPGDGR ANSLDNDATT VPMQFLARMA HETGDIRYRD | 120 |
SFLKGVDYLL AAQYPGGGWP QFWPLRKGYY SHITFNDGAM IRVMHLLRDV ADGEAPYGFV | 180 |
DGMRRRKAAE AVRIGIECIL KCQVVFDGVP TVWCAQHDVK TLAPAQARSY EHPSLSGSES | 240 |
AGVLIFLMSV SDPTPEMMRA VQAGVEWFDS VKIEGYRYNK SQTGLALTKD QQAGPLWARF | 300 |
YEIKSNRPIF SDRDGVIKYD IQEIGDERRG GYSWYGNWGQ KVAQKYAQWP HREGAKKRLR | 360 |
SRSRRIPEHS GASGYRCRVI VSTDIGGTDP DDFQSMVHLL VYSDLLDLEG LVSSPYGEGR | 420 |
MKDILDVIDC YEQDYECLSS YSDKYPNPDI LRAITKQGEI ERAPYAGVRR PTEGSRWIID | 480 |
CAHRDDPRPL YLLVWGGLED VAQALNDAPE ILPKLRVYWI GGPNKKWSPD AYQYVVDHHP | 540 |
TLWMIESNAT YRGWYTGGDQ SGVWGNEQFV SEHIKGIGAL GNFFVRQKAD IKMGDTPSVG | 600 |
WLLNGRLEDP SHPGWGGRYV RAWKRPNLKL NRLPKESDRF QVFGILELVI PAGDAPPDAK | 660 |
ATLIVENQRL IGHLADDRTM RFRFCPKAAK QYSFQLESTV ASLDGLRGAI TACAPEPSVA | 720 |
ARPDTRLPNW WTDDLAPSLA EGPHSGAKTV SRWRESYLSD FAGRILRCQR PVPVNSAELA | 780 |
P | 781 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.