Information for CAZyme ID: QEC54958.1
Basic Information
GenBank ID | QEC54958.1 |
Family | GH20 |
Sequence Length | 793 |
UniProt ID | A0A5B8UEM8(100,100)![]() |
Average pLDDT? | 91.00 |
CAZy50 ID | 28046 |
CAZy50 Rep | Yes, QEC54958.1 |
Structure Cluster | SC_GH20_clus161 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 661481 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Chitinophagia |
Order | Chitinophagales |
Family | Chitinophagaceae |
Genus | Flavisolibacter |
Species | Flavisolibacter ginsenosidimutans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKNLICLLLL VPCFALAQTK TNLNVIPQPV SIQMGNGQFT LTKKTVIVAS DAEGRKTANY | 60 |
LNDYLQQTYG FRLDVDKRES KNYIRLTTKK FIKAPDKDAY NLTVTPDGIA ILGDTYEGTF | 120 |
YGVQTLIQLL PATPNTQPQA PNFSIPVVSI QDYPRFAYRG MHLDVGRHFF PASFVKKYID | 180 |
YLALHKLNYF HWHLTDDQGW RIEIKKYPEL MSEAAYRNGT IIGRYPGTGN DNIRYGGYYT | 240 |
QDEVKDIVKY AADRHITVIP EIEMPGHSSA AIAAYPWLSC FPDKRTIIPN YPSQESSRPD | 300 |
VPAGAAHVKL VQETWGVFED IYCAGKDSTF TFLQNVLDEV ITLFPSTFIH IGGDEAPKTH | 360 |
WKHCPLCQAR IKAEGLKDEH GLQSYFIQRM EKYLNTKGKT IIGWDEILEG GLAPNAVVMS | 420 |
WRGEQGGIEA AKQKHQVIMT PGEYVYLDHS QTKNEDSVTI GGYTPIEKVY AYEPVPKELS | 480 |
ADEAKYILGA QANLWTEYIA YLSKVEYMVF PRMSALSEVL WSPKEKRNWK DFEQRLQTQF | 540 |
KRYDLWKANY SKAYFDLQSS ILPTPNNEGV IWKLQSRSKT DDILISKIVG YGSTRSQGRY | 600 |
PLGKGENSRL INSDGMYVAY LKSQKLIKST LQQSFFFNKA TGKKVFITAT PNEKYPGQGG | 660 |
AFSLVNGVYS TKGLSYPDWI GFIGDDLEAT IDLGKTEKID SVRMHTLNQN GSWIYLPQYV | 720 |
EVFTSNNGKD FTSVGKSSDF IPDMLTMGWI TVRVQKTSAR YIKLLAKNYG LIPDDKPGGG | 780 |
NKAWLFADEI QVY | 793 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.00 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKNLICLLLL VPCFALAQTK TNLNVIPQPV SIQMGNGQFT LTKKTVIVAS DAEGRKTANY | 60 |
LNDYLQQTYG FRLDVDKRES KNYIRLTTKK FIKAPDKDAY NLTVTPDGIA ILGDTYEGTF | 120 |
YGVQTLIQLL PATPNTQPQA PNFSIPVVSI QDYPRFAYRG MHLDVGRHFF PASFVKKYID | 180 |
YLALHKLNYF HWHLTDDQGW RIEIKKYPEL MSEAAYRNGT IIGRYPGTGN DNIRYGGYYT | 240 |
QDEVKDIVKY AADRHITVIP EIEMPGHSSA AIAAYPWLSC FPDKRTIIPN YPSQESSRPD | 300 |
VPAGAAHVKL VQETWGVFED IYCAGKDSTF TFLQNVLDEV ITLFPSTFIH IGGDEAPKTH | 360 |
WKHCPLCQAR IKAEGLKDEH GLQSYFIQRM EKYLNTKGKT IIGWDEILEG GLAPNAVVMS | 420 |
WRGEQGGIEA AKQKHQVIMT PGEYVYLDHS QTKNEDSVTI GGYTPIEKVY AYEPVPKELS | 480 |
ADEAKYILGA QANLWTEYIA YLSKVEYMVF PRMSALSEVL WSPKEKRNWK DFEQRLQTQF | 540 |
KRYDLWKANY SKAYFDLQSS ILPTPNNEGV IWKLQSRSKT DDILISKIVG YGSTRSQGRY | 600 |
PLGKGENSRL INSDGMYVAY LKSQKLIKST LQQSFFFNKA TGKKVFITAT PNEKYPGQGG | 660 |
AFSLVNGVYS TKGLSYPDWI GFIGDDLEAT IDLGKTEKID SVRMHTLNQN GSWIYLPQYV | 720 |
EVFTSNNGKD FTSVGKSSDF IPDMLTMGWI TVRVQKTSAR YIKLLAKNYG LIPDDKPGGG | 780 |
NKAWLFADEI QVY | 793 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.