Information for CAZyme ID: QDY85834.1
Basic Information
GenBank ID | QDY85834.1 |
Family | GH32 |
Sequence Length | 472 |
UniProt ID | A0A5B8K436(100,100)![]() |
Average pLDDT? | 94.15 |
CAZy50 ID | 75063 |
CAZy50 Rep | Yes, QDY85834.1 |
Structure Cluster | SC_GH32_clus93 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1406 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus polymyxa |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNKSDAYHLK YHITPPYGLL NDPNGLAFFK HQYHVFYQWN PKGTEHRNKC WGHVVSSDLV | 60 |
HWQRKSVALE PSEWYDKDGI YSGGAIVHQE KLYLFYTGNV IRDDGVKESY QCAAISEDGE | 120 |
HFQKMGPLFE HPKGYTRHVR DPKVWRDRNG NWWLIVGAQR EDLTGDTLIY KSTDLSVWEC | 180 |
QGSFLEHDRE FGYMWECPDL LHFAENDIFV FSPQGLPEAG EYYRNPNQSG YMVGKFMDTG | 240 |
KFNGNLAHFK ELDRGFDFYA PQSFKVNDRT IMFGWMSGMN EEAERAVPTI QEGWIHALTL | 300 |
PREIVLSNGV LYQKPLPELQ WLRLDGEHSQ KDIHKNGVWL LPSLQVECIV HFSKLTENFK | 360 |
MIIRNAVEIN YDSAENSITV WRTNWLTNQR EYRKATLANQ LADMQIFIES SSLEIFLNEG | 420 |
EEVFTLRYFL EDTEQRSVVL EAGDNEGKIE IYQLQECDVI INPQNDMSIF HL | 472 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.15 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MNKSDAYHLK YHITPPYGLL NDPNGLAFFK HQYHVFYQWN PKGTEHRNKC WGHVVSSDLV | 60 |
HWQRKSVALE PSEWYDKDGI YSGGAIVHQE KLYLFYTGNV IRDDGVKESY QCAAISEDGE | 120 |
HFQKMGPLFE HPKGYTRHVR DPKVWRDRNG NWWLIVGAQR EDLTGDTLIY KSTDLSVWEC | 180 |
QGSFLEHDRE FGYMWECPDL LHFAENDIFV FSPQGLPEAG EYYRNPNQSG YMVGKFMDTG | 240 |
KFNGNLAHFK ELDRGFDFYA PQSFKVNDRT IMFGWMSGMN EEAERAVPTI QEGWIHALTL | 300 |
PREIVLSNGV LYQKPLPELQ WLRLDGEHSQ KDIHKNGVWL LPSLQVECIV HFSKLTENFK | 360 |
MIIRNAVEIN YDSAENSITV WRTNWLTNQR EYRKATLANQ LADMQIFIES SSLEIFLNEG | 420 |
EEVFTLRYFL EDTEQRSVVL EAGDNEGKIE IYQLQECDVI INPQNDMSIF HL | 472 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.