Information for CAZyme ID: QDG73346.1
Basic Information
| GenBank ID | QDG73346.1 |
| Family | GH148 |
| Sequence Length | 757 |
| UniProt ID | A0A4Y6RL91(100,100) |
| Average pLDDT? | 90.91 |
| CAZy50 ID | 31939 |
| CAZy50 Rep | Yes, QDG73346.1 |
| Structure Cluster | SC_GH148_clus6 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2590869 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium tructae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MFFNYMTSRQ VYRGIGKWLL LAGLCAFSSA GAIAAEWKTV EDTSLVIRDG SPLDFSKWLP | 60 |
| AGPAGSQGAV ISGGPRGRFA FAKNPAVPAT LNCVSLAWSP ATGSFPDKVM ADLFARQIKV | 120 |
| HGYNLVRIHH VEAILMTNRA VDFDFDPVQL DRFYYFLSAL KKQGVYWVID VMTSENGAFG | 180 |
| NVLPNRWIEK HNLKVKVHVK EDAKAHWRML VDKLYVPKNP YTGLSPLNDP AMAGMILLNE | 240 |
| GSLNFLAQTR ERGIWPAELQ PLFVAFLKRK YVNDAALRTA WGDLRADESI VTGTVRMPEA | 300 |
| RNYSVRMQDF QRLLGEVETD TGRWMATHLR SRGYGGPLTS YDNWNTTQAG ATRAGFGWID | 360 |
| MHAYHDEVLG FSPGTKIAQT SSTDGGARYA RWLATARHAG KPFSVTEYGQ PFWNRFRFEA | 420 |
| GAIVPAMAAL QGWDYACLHG EGGVDLTFYN NVIRKVAVHP YGVGIDPVTR AGETLAALLF | 480 |
| MRGDVAPSPN RISIDYQGDS AFTRPYLDAV PDDLGMVAWM TGVEVVYPKE KSSVAVKQVW | 540 |
| QPTTFNQTTW GLAKNTAQAA MTPQDFATDL RVAELRKFGI LDSANRSNVA AGLYESDTKQ | 600 |
| LLMDTRNRRF IVTTPRTEAI TMAAPSSNLT VKYLTVVSTA SPALLSASSL DDLALADSKK | 660 |
| ILLILATDAQ NTGMKFADAD RRELVSLGKI PVQIQRGVAS VKLALNHATP MKLTALTLNG | 720 |
| EPGNEIPLTR TGNTWTMTLD SSASVKGPTT FFLLEKK | 757 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MFFNYMTSRQ VYRGIGKWLL LAGLCAFSSA GAIAAEWKTV EDTSLVIRDG SPLDFSKWLP | 60 |
| AGPAGSQGAV ISGGPRGRFA FAKNPAVPAT LNCVSLAWSP ATGSFPDKVM ADLFARQIKV | 120 |
| HGYNLVRIHH VEAILMTNRA VDFDFDPVQL DRFYYFLSAL KKQGVYWVID VMTSENGAFG | 180 |
| NVLPNRWIEK HNLKVKVHVK EDAKAHWRML VDKLYVPKNP YTGLSPLNDP AMAGMILLNE | 240 |
| GSLNFLAQTR ERGIWPAELQ PLFVAFLKRK YVNDAALRTA WGDLRADESI VTGTVRMPEA | 300 |
| RNYSVRMQDF QRLLGEVETD TGRWMATHLR SRGYGGPLTS YDNWNTTQAG ATRAGFGWID | 360 |
| MHAYHDEVLG FSPGTKIAQT SSTDGGARYA RWLATARHAG KPFSVTEYGQ PFWNRFRFEA | 420 |
| GAIVPAMAAL QGWDYACLHG EGGVDLTFYN NVIRKVAVHP YGVGIDPVTR AGETLAALLF | 480 |
| MRGDVAPSPN RISIDYQGDS AFTRPYLDAV PDDLGMVAWM TGVEVVYPKE KSSVAVKQVW | 540 |
| QPTTFNQTTW GLAKNTAQAA MTPQDFATDL RVAELRKFGI LDSANRSNVA AGLYESDTKQ | 600 |
| LLMDTRNRRF IVTTPRTEAI TMAAPSSNLT VKYLTVVSTA SPALLSASSL DDLALADSKK | 660 |
| ILLILATDAQ NTGMKFADAD RRELVSLGKI PVQIQRGVAS VKLALNHATP MKLTALTLNG | 720 |
| EPGNEIPLTR TGNTWTMTLD SSASVKGPTT FFLLEKK | 757 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.