Information for CAZyme ID: QAY65054.1
Basic Information
| GenBank ID | QAY65054.1 |
| Family | GH105 |
| Sequence Length | 746 |
| UniProt ID | A0A4P6EQE5(100,100) |
| Average pLDDT? | 92.96 |
| CAZy50 ID | 33197 |
| CAZy50 Rep | Yes, QAY65054.1 |
| Structure Cluster | SC_GH105_clus31 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2509456 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus protaetiae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLPYFDANDS IARRTGGSDE HVLAAIAGRF AGAHPKLPVV YRLHTERGFR REQDYRYDMD | 60 |
| LQALWPDMED GQAVYVWGKI WSDQETVMPF SLSCYGPTKV FVNGSAAFAS NLNDDVFPDR | 120 |
| RVYFRSPIRK GWNHLVLEFV KTGTGCGGKF GTGSIKGFPL HVLAPSPELS GMEGWCCSGP | 180 |
| QAGKWPEEQL LSASVDGLAD AAIWHPQLAV RPEEAAFGRL GALFAGAEAG MAAYAWTKLM | 240 |
| NRRIDSGKVR LQGSHDGPCS LYLNGVRIYQ SGAASGSFVV EVDGLPFGSS DLLVQTVKSG | 300 |
| IKWDLELEVA APARQQDMRD EAIALVEPYP VEGLREPWLY LGPFPAGEAP APDELGRMDR | 360 |
| VYGEGEYRTF WRGGQPGTWV RPYLENAMFG KWNYPLGVTL YGIMRTGELL DDPHYIHYAA | 420 |
| EHIEQCTALH DYSLWDGNKF GSPGTNHQLS FIDSLDDCGS FGAVMLEACK HRPLEGAAQA | 480 |
| AAHIALYISR KQDRLEDGAL YRVRGTTDFM ADTMWCDDLY MSTPFLCKYY ERTGETAYLD | 540 |
| DAAQQFLLYR KRLFMPEHQI MHHVYDLKFG KPNGVAWGRG NGWVLFSLTE LLAVMPHTHR | 600 |
| LYPPILAFFR ELCEGYLRLQ GANGLWHQVL TDPESYEEAS CTSMFVYAFA RGVRFGWLEE | 660 |
| PEPYAAAVLR GWEGLKAHCI DKHGNVYGVC RGSGYSYSRY YYKDELTWQL NDTHGIGIVL | 720 |
| LAGTETIRLR QHINAQKSPQ AGLAAN | 746 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.96 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MLPYFDANDS IARRTGGSDE HVLAAIAGRF AGAHPKLPVV YRLHTERGFR REQDYRYDMD | 60 |
| LQALWPDMED GQAVYVWGKI WSDQETVMPF SLSCYGPTKV FVNGSAAFAS NLNDDVFPDR | 120 |
| RVYFRSPIRK GWNHLVLEFV KTGTGCGGKF GTGSIKGFPL HVLAPSPELS GMEGWCCSGP | 180 |
| QAGKWPEEQL LSASVDGLAD AAIWHPQLAV RPEEAAFGRL GALFAGAEAG MAAYAWTKLM | 240 |
| NRRIDSGKVR LQGSHDGPCS LYLNGVRIYQ SGAASGSFVV EVDGLPFGSS DLLVQTVKSG | 300 |
| IKWDLELEVA APARQQDMRD EAIALVEPYP VEGLREPWLY LGPFPAGEAP APDELGRMDR | 360 |
| VYGEGEYRTF WRGGQPGTWV RPYLENAMFG KWNYPLGVTL YGIMRTGELL DDPHYIHYAA | 420 |
| EHIEQCTALH DYSLWDGNKF GSPGTNHQLS FIDSLDDCGS FGAVMLEACK HRPLEGAAQA | 480 |
| AAHIALYISR KQDRLEDGAL YRVRGTTDFM ADTMWCDDLY MSTPFLCKYY ERTGETAYLD | 540 |
| DAAQQFLLYR KRLFMPEHQI MHHVYDLKFG KPNGVAWGRG NGWVLFSLTE LLAVMPHTHR | 600 |
| LYPPILAFFR ELCEGYLRLQ GANGLWHQVL TDPESYEEAS CTSMFVYAFA RGVRFGWLEE | 660 |
| PEPYAAAVLR GWEGLKAHCI DKHGNVYGVC RGSGYSYSRY YYKDELTWQL NDTHGIGIVL | 720 |
| LAGTETIRLR QHINAQKSPQ AGLAAN | 746 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.