Information for CAZyme ID: EIE23449.1
Basic Information
GenBank ID | EIE23449.1 |
Family | GT96 |
Sequence Length | 1402 |
UniProt ID | I0YYI0(100,100)![]() |
Average pLDDT? | 69.15 |
CAZy50 ID | 4885 |
CAZy50 Rep | Yes, EIE23449.1 |
Structure Cluster | SC_GT96_clus13 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 574566 |
Kingdom | Eukaryota |
Phylum | Chlorophyta |
Class | Trebouxiophyceae |
Order | |
Family | |
Genus | Coccomyxa |
Species | Coccomyxa subellipsoidea |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVVPAVGLHA FISVAHAGGQ KQGRVLRLNL ATAALEPQVH RTSAARPLTV SPGGGYVATI | 60 |
DKHTLFIWST KDADKRPLAL HHTKAFTCVA IDATGDRVAA GDVSGRISMW NGFAPAVAAA | 120 |
AAASEDKGAA GEVASQSAQQ QGQKRKSREV RDAGLAKETL HWHSSAVRSI VFSQDGSYLL | 180 |
SGGAEAVLVI WRLDNGARTY LPRMAGALTA ITPVPSDAAC YILTQADNTI RMVNVAAMRV | 240 |
LCSVHGLRPR VAGTPSGTVA ALVPGSGELA LAGAGSVLQL FDAVRDRHID RVQVGHRNVA | 300 |
SLAGTDEASQ GGQRAVESHI SHIAYSSDGT VMATVDVHPS AAASGAVGSA LKFWDRRITG | 360 |
AAAGGAPLYT LNSHISEPQR GVVSGLAYHP SEHIAATTGV DGVLSMWRRS AAGKRSEKAP | 420 |
AAWRCTSTAA YKGQPMSAVA FSGDGSLVAA AVSGSVTLWD PSSNALITVL ANPAPARSSA | 480 |
MRRLEFVPST HFLVGISADA APSLVVWNLV TASVWWSAAV ASSCLAVDPH HGAFAIAVPP | 540 |
EPLRRFSGSA APPALPAGPA PTRPMTNGRS ETTVRQPRRA LPPLNAVHMN GRRDAPATSG | 600 |
RPVMNGVAAN GGEAASGSDE DAGHGGEDPA RQLQAGAACS GGAFWFEEAE AAGDERALAH | 660 |
ASGGVAAEPA ASGRGGLMYG GGGGSVLLFD AGCPTPKQAW LLPRSGAAAL MFAGNGTPLA | 720 |
AAGADRAPAG TSPLLILTND RQYTIAAAPG ADTTESAADV SAAQTAGVPK RAPVGFEAAF | 780 |
GPLNAARKTP EQPEARYSAA DDGQTSVQEL WDAPSHALPP LSVLAAVLFA ALCFLGYAHA | 840 |
SRAKSASVHT IIPVECTNGY FEWQILGFVY SARRAGQEGP ITRLMSCTEE QLKDYKGMDL | 900 |
VPTFVAPSFK NIVPDDEYAA YNKPGAIMAW LQEHEPKEDY ILIVDADNIM RFPFDPIELK | 960 |
VEPGWAYSGY YFYEILKGCS NELADKHIAQ VQPRQDTLAG PKGRRADTVG VPILMAKSDL | 1020 |
KKVAPLWLEY SKRFRLDPAT FDGNLTGDDF TKTPGDKSWM SEMYGYSYAA AVANVWHRRV | 1080 |
DYTDSLLPGY AAIWPPKVLH YGAKWTVPNT TWAWHKAWYH DDFDVTVCPP WDLSAERPSA | 1140 |
GLFPYPPRPL EIPSEGEDFL RDLIAIEPVV VLNAAFCERH MKHCPKSQQL EQECAKVRQQ | 1200 |
EIEMDIAFDV MEMVMQEEEC QNKHPDCEEW ARNGECEKSP RYMFWGCRLS CGRCYPPTLQ | 1260 |
VRHHAKVPTT AVAQGSAWPY GAGKKKGSGS WLGTPKASTL DGRQWLDAHP ELANPVEAMP | 1320 |
AVQPGRHNAH SLRLRNRAAS GLLKGLSQGQ GSQLQLGGRS AALADVTEEQ MIGDVTFFIV | 1380 |
LMGWLGVVLW GLILMYFLGI LQ | 1402 |
Predicted 3D structure by AlphaFold2 with pLDDT = 69.15 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MVVPAVGLHA FISVAHAGGQ KQGRVLRLNL ATAALEPQVH RTSAARPLTV SPGGGYVATI | 60 |
DKHTLFIWST KDADKRPLAL HHTKAFTCVA IDATGDRVAA GDVSGRISMW NGFAPAVAAA | 120 |
AAASEDKGAA GEVASQSAQQ QGQKRKSREV RDAGLAKETL HWHSSAVRSI VFSQDGSYLL | 180 |
SGGAEAVLVI WRLDNGARTY LPRMAGALTA ITPVPSDAAC YILTQADNTI RMVNVAAMRV | 240 |
LCSVHGLRPR VAGTPSGTVA ALVPGSGELA LAGAGSVLQL FDAVRDRHID RVQVGHRNVA | 300 |
SLAGTDEASQ GGQRAVESHI SHIAYSSDGT VMATVDVHPS AAASGAVGSA LKFWDRRITG | 360 |
AAAGGAPLYT LNSHISEPQR GVVSGLAYHP SEHIAATTGV DGVLSMWRRS AAGKRSEKAP | 420 |
AAWRCTSTAA YKGQPMSAVA FSGDGSLVAA AVSGSVTLWD PSSNALITVL ANPAPARSSA | 480 |
MRRLEFVPST HFLVGISADA APSLVVWNLV TASVWWSAAV ASSCLAVDPH HGAFAIAVPP | 540 |
EPLRRFSGSA APPALPAGPA PTRPMTNGRS ETTVRQPRRA LPPLNAVHMN GRRDAPATSG | 600 |
RPVMNGVAAN GGEAASGSDE DAGHGGEDPA RQLQAGAACS GGAFWFEEAE AAGDERALAH | 660 |
ASGGVAAEPA ASGRGGLMYG GGGGSVLLFD AGCPTPKQAW LLPRSGAAAL MFAGNGTPLA | 720 |
AAGADRAPAG TSPLLILTND RQYTIAAAPG ADTTESAADV SAAQTAGVPK RAPVGFEAAF | 780 |
GPLNAARKTP EQPEARYSAA DDGQTSVQEL WDAPSHALPP LSVLAAVLFA ALCFLGYAHA | 840 |
SRAKSASVHT IIPVECTNGY FEWQILGFVY SARRAGQEGP ITRLMSCTEE QLKDYKGMDL | 900 |
VPTFVAPSFK NIVPDDEYAA YNKPGAIMAW LQEHEPKEDY ILIVDADNIM RFPFDPIELK | 960 |
VEPGWAYSGY YFYEILKGCS NELADKHIAQ VQPRQDTLAG PKGRRADTVG VPILMAKSDL | 1020 |
KKVAPLWLEY SKRFRLDPAT FDGNLTGDDF TKTPGDKSWM SEMYGYSYAA AVANVWHRRV | 1080 |
DYTDSLLPGY AAIWPPKVLH YGAKWTVPNT TWAWHKAWYH DDFDVTVCPP WDLSAERPSA | 1140 |
GLFPYPPRPL EIPSEGEDFL RDLIAIEPVV VLNAAFCERH MKHCPKSQQL EQECAKVRQQ | 1200 |
EIEMDIAFDV MEMVMQEEEC QNKHPDCEEW ARNGECEKSP RYMFWGCRLS CGRCYPPTLQ | 1260 |
VRHHAKVPTT AVAQGSAWPY GAGKKKGSGS WLGTPKASTL DGRQWLDAHP ELANPVEAMP | 1320 |
AVQPGRHNAH SLRLRNRAAS GLLKGLSQGQ GSQLQLGGRS AALADVTEEQ MIGDVTFFIV | 1380 |
LMGWLGVVLW GLILMYFLGI LQ | 1402 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.