CAZyme3D

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Entry ID

Information for CAZyme ID: EEA05041.1

Basic Information

GenBank IDEEA05041.1
FamilyGT92
Sequence Length538
UniProt IDB6AA00(100,100)Download
Average pLDDT?77.17
CAZy50 ID61509
CAZy50 RepYes, EEA05041.1
Structure ClusterSC_GT92_clus12
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID441375
KingdomEukaryota
PhylumApicomplexa
ClassConoidasida
OrderEucoccidiorida
FamilyCryptosporidiidae
GenusCryptosporidium
SpeciesCryptosporidium muris

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MHHLSIKMWG  VVLLFQFFHL  LDHNLRTRNV  IFLKKSNISI  FEEGNTQIFD  KYYSTKQIDE60
TTTDDWKMIS  SEDNPYIIYV  YSAYLDLRGF  PEEESYGVRI  NSLIHYESSL  EIAQIIKCDL120
FSEKKYIGGI  PHIVIHKEHH  NKLFASSTIW  CKPELKYNTS  NKILKSITHV  KIRMGSSLSS180
NSFKTSELIL  VVHSLEMKDL  FLFEASICIR  PWWGEPTKTI  YNGSESKEFD  DITLLIEFFE240
VYRLLGINRI  TMYNNYLPLG  SAVSKIIQYY  SNIAGFIEVV  PYTLPLIPYK  EVWDYAQISM300
IQDCLLRHTR  KSKYVLFIDT  DEYLLPTVPG  IGLPSLFDMI  LERKKFVGAI  WVPMYLHFLE360
WPDDPRGVKI  YPSFKVITKE  LHLPLGKIFS  FNLKSLQKTC  RLAFAGTQKN  KKSRRKIVVR420
PETIMYMGIH  EPEKMLSNYS  MIQMPIVDIR  NNSCIHSCRI  TASLHHYRRA  MGVVSNNPKN480
REFQMLFNSN  KCLFNENPKV  SDGTIVDKTA  WDILGAKLYK  SVIKVIQDID  YFESEQIL538

Predicted 3D structure by AlphaFold2 with pLDDT = 77.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MHHLSIKMWG  VVLLFQFFHL  LDHNLRTRNV  IFLKKSNISI  FEEGNTQIFD  KYYSTKQIDE60
TTTDDWKMIS  SEDNPYIIYV  YSAYLDLRGF  PEEESYGVRI  NSLIHYESSL  EIAQIIKCDL120
FSEKKYIGGI  PHIVIHKEHH  NKLFASSTIW  CKPELKYNTS  NKILKSITHV  KIRMGSSLSS180
NSFKTSELIL  VVHSLEMKDL  FLFEASICIR  PWWGEPTKTI  YNGSESKEFD  DITLLIEFFE240
VYRLLGINRI  TMYNNYLPLG  SAVSKIIQYY  SNIAGFIEVV  PYTLPLIPYK  EVWDYAQISM300
IQDCLLRHTR  KSKYVLFIDT  DEYLLPTVPG  IGLPSLFDMI  LERKKFVGAI  WVPMYLHFLE360
WPDDPRGVKI  YPSFKVITKE  LHLPLGKIFS  FNLKSLQKTC  RLAFAGTQKN  KKSRRKIVVR420
PETIMYMGIH  EPEKMLSNYS  MIQMPIVDIR  NNSCIHSCRI  TASLHHYRRA  MGVVSNNPKN480
REFQMLFNSN  KCLFNENPKV  SDGTIVDKTA  WDILGAKLYK  SVIKVIQDID  YFESEQIL538

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT92(231-485)

MHHLSIKMWG  VVLLFQFFHL  LDHNLRTRNV  IFLKKSNISI  FEEGNTQIFD  KYYSTKQIDE60
TTTDDWKMIS  SEDNPYIIYV  YSAYLDLRGF  PEEESYGVRI  NSLIHYESSL  EIAQIIKCDL120
FSEKKYIGGI  PHIVIHKEHH  NKLFASSTIW  CKPELKYNTS  NKILKSITHV  KIRMGSSLSS180
NSFKTSELIL  VVHSLEMKDL  FLFEASICIR  PWWGEPTKTI  YNGSESKEFD  DITLLIEFFE240
VYRLLGINRI  TMYNNYLPLG  SAVSKIIQYY  SNIAGFIEVV  PYTLPLIPYK  EVWDYAQISM300
IQDCLLRHTR  KSKYVLFIDT  DEYLLPTVPG  IGLPSLFDMI  LERKKFVGAI  WVPMYLHFLE360
WPDDPRGVKI  YPSFKVITKE  LHLPLGKIFS  FNLKSLQKTC  RLAFAGTQKN  KKSRRKIVVR420
PETIMYMGIH  EPEKMLSNYS  MIQMPIVDIR  NNSCIHSCRI  TASLHHYRRA  MGVVSNNPKN480
REFQMLFNSN  KCLFNENPKV  SDGTIVDKTA  WDILGAKLYK  SVIKVIQDID  YFESEQIL538

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help