Information for CAZyme ID: CDW72056.1
Basic Information
GenBank ID | CDW72056.1 |
Family | GH1, GH162 |
Sequence Length | 1017 |
UniProt ID | A0A077ZUB0(100,100) |
Average pLDDT? | 91.11 |
CAZy50 ID | 13569 |
CAZy50 Rep | Yes, CDW72056.1 |
Structure Cluster | SC_GH162_clus1, SC_GH1_clus259 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 5949 |
Kingdom | Eukaryota |
Phylum | Ciliophora |
Class | Spirotrichea |
Order | Sporadotrichida |
Family | Oxytrichidae |
Genus | Stylonychia |
Species | Stylonychia lemnae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 91.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.