Information for CAZyme ID: CDS03648.1
Basic Information
GenBank ID | CDS03648.1 |
Family | GT2 |
Sequence Length | 1919 |
UniProt ID | A0A077WBW5(100,100)![]() |
Average pLDDT? | 74.41 |
CAZy50 ID | 1730 |
CAZy50 Rep | Yes, CDS03648.1 |
Structure Cluster | SC_GT2_clus499 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 688394 |
Kingdom | Eukaryota |
Phylum | Mucoromycota |
Class | Mucoromycetes |
Order | Mucorales |
Family | Lichtheimiaceae |
Genus | Lichtheimia |
Species | Lichtheimia ramosa |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MQDDSRTDLV GLLTGPNASV SEDTIANFLS SRYKRNQVYT RAGHSNLIVI NPYQPLEAVN | 60 |
DATLQTYADV GYRDVSENKP MLQPHVYDLA ARAYFHMRRT GEDQSIVLSG ITGSGKSTTR | 120 |
EHLVDQLTLL STHSKKENKL QQQIRNAGVI LEAFGHARTT QTRSASKFGM FQELQFSERG | 180 |
RILGAKTLTY AFDKARLTKV PLNERTYHVF YALLAGTTVD EKNALHINFG FDYFHYLNQS | 240 |
RCITVADRND DIAFGDLKSA LKVCGFKAKT VTQIFQLLAA ILHLGNLEFQ DTRGGEVAEE | 300 |
TCAVKNERVL EIVSAMLGVS PSKLETALTY KLRLIRNELC TAFMNAQGAT EQRDSLAQAL | 360 |
YHVLFLWIVE SINTKICYND GDPANFIGIL DQFGFQNFKE NGFEEFSANF ANERIHQFLI | 420 |
YQRFNDDANL NALMIRDNVP LPRILTMDNA GCLDLLVGKE RDNASTNVAQ KSAALGLGGV | 480 |
VGLMDRDCAR YQTGATDATD ANMLANLQRQ FSGHSSFSKS TQTYSFGINH FSGTVHYTVD | 540 |
GFVEKNLNTL SPDFVTLLRD NSSNAFVATL FSSTAMATES HPKDGRTIVK AQLSSKPTRA | 600 |
PSMRRRPTNK RRGAAAAATG APDDVDTGEA DPSKEAEQAY QDMQVMTVMD QLYVTLRDLC | 660 |
TTMADTRIYN IIHLRPNDMQ TADMVDMKRL KSQVRAFLLP DLVQRSSLEY ANHYAFAEFL | 720 |
MRYDRLVVSL QIDGSKSERS MVESVCAIMN WTEQQAYIGN DNIWLAFDVW KELEDSLRAA | 780 |
EKEERARMKA AMSENNNTDV MSDAPGAMDP HFDPHYEESN DRLLPTGGAY LDPQHQPAHM | 840 |
ARASVFDDNG SYYESDYGMK REVEGSQWGE ESEWGMKGLS EGFGPNMDMS KMIEDYSAPQ | 900 |
NEQVEEMEIS AVRVWWVRFV WAMTWWIPSF LLRTVGKMKR QDVQLAWREK FTLCLLIFIF | 960 |
SAIVIFVIVG LSPILCPGTK EMYSNANVQN HNNPEDMYVS HRGVVYDITN FARSNHGSAS | 1020 |
LPATTDTMQT LAGLDVSWTI PPPLTSACEG LVTSPSVTIQ PNQTIELGPF VHYSGDQLQQ | 1080 |
TSITAMKDQS WYWNTFLPQM KLYKKGHIVQ DMNTIADDYK GWTRYAMAIN GKVYDLTDYF | 1140 |
TTADRYASGS TAGDYSFLDD AVEEIFKKFS GTDGTDNWNK YTAALSPDVL AANMNCLNNM | 1200 |
FYIGDVDERE SVRCTFTNYL LLAFALVMCL TILIKFLAAL QFGSAPTPED HDKFVICQVP | 1260 |
CYTEDEESLK KTIDSLTVMN YDDKRKLLFI IADGMVMGGG NDRPTPRIVL DVLGYDTKND | 1320 |
PEPLMFKSIG EGSKQLNYGK VYSGLYECEG HVVPYIVIVK VGKASERAKP GNRGKRDSQL | 1380 |
ICMNFLNKVH FDGEMTPLEL EMYHQIKNVI GVNPSFYEYV LMVDSDTEVD TNALNHLIST | 1440 |
MLHDGSIIGL CGETRLVNED RSLTTMIQVY EYYISHHLAK AFESLFGSVT CLPGCFCMYR | 1500 |
IRTPVKNEPL INSPKVIGDY SDNNVDTLHK KNLLHLGEDR YLTTLMMKHF PQYKMKFTPH | 1560 |
AFCKTVAPDR IRVLVSQRRR WINSTIHNLF ELILLPDLCG FCCFSMRFVV LIDLIGTLTL | 1620 |
PVSVVYLVYL IYVIADKSQP LPILSLAMLA GMYGLQAILF ILKRQWQHIG WMIFYICAIP | 1680 |
IFSFALPIYS FWHFDDFSWG NTRIVVGDKK QKKIIVNDDE KFDDKMIPLK KWSVYEQELW | 1740 |
EMGSTGSRET GVTGHSYRSY YSQGGTPMNN MPPNMMGGAG GAPTGTGSVI YDGRSMYGGG | 1800 |
SVIYDGNRSM YGGGHNGSQD FMDGGMRPGS RMMPPGGPGS VMGMPGYTGS VMGAPGYTGS | 1860 |
MMAPPMAGYT GSMMMAPQPG GYAGSVIGSE YGGAGPQDHL MAQHQQRGSF MPHQQPPYQ | 1919 |
Predicted 3D structure by AlphaFold2 with pLDDT = 74.41 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MQDDSRTDLV GLLTGPNASV SEDTIANFLS SRYKRNQVYT RAGHSNLIVI NPYQPLEAVN | 60 |
DATLQTYADV GYRDVSENKP MLQPHVYDLA ARAYFHMRRT GEDQSIVLSG ITGSGKSTTR | 120 |
EHLVDQLTLL STHSKKENKL QQQIRNAGVI LEAFGHARTT QTRSASKFGM FQELQFSERG | 180 |
RILGAKTLTY AFDKARLTKV PLNERTYHVF YALLAGTTVD EKNALHINFG FDYFHYLNQS | 240 |
RCITVADRND DIAFGDLKSA LKVCGFKAKT VTQIFQLLAA ILHLGNLEFQ DTRGGEVAEE | 300 |
TCAVKNERVL EIVSAMLGVS PSKLETALTY KLRLIRNELC TAFMNAQGAT EQRDSLAQAL | 360 |
YHVLFLWIVE SINTKICYND GDPANFIGIL DQFGFQNFKE NGFEEFSANF ANERIHQFLI | 420 |
YQRFNDDANL NALMIRDNVP LPRILTMDNA GCLDLLVGKE RDNASTNVAQ KSAALGLGGV | 480 |
VGLMDRDCAR YQTGATDATD ANMLANLQRQ FSGHSSFSKS TQTYSFGINH FSGTVHYTVD | 540 |
GFVEKNLNTL SPDFVTLLRD NSSNAFVATL FSSTAMATES HPKDGRTIVK AQLSSKPTRA | 600 |
PSMRRRPTNK RRGAAAAATG APDDVDTGEA DPSKEAEQAY QDMQVMTVMD QLYVTLRDLC | 660 |
TTMADTRIYN IIHLRPNDMQ TADMVDMKRL KSQVRAFLLP DLVQRSSLEY ANHYAFAEFL | 720 |
MRYDRLVVSL QIDGSKSERS MVESVCAIMN WTEQQAYIGN DNIWLAFDVW KELEDSLRAA | 780 |
EKEERARMKA AMSENNNTDV MSDAPGAMDP HFDPHYEESN DRLLPTGGAY LDPQHQPAHM | 840 |
ARASVFDDNG SYYESDYGMK REVEGSQWGE ESEWGMKGLS EGFGPNMDMS KMIEDYSAPQ | 900 |
NEQVEEMEIS AVRVWWVRFV WAMTWWIPSF LLRTVGKMKR QDVQLAWREK FTLCLLIFIF | 960 |
SAIVIFVIVG LSPILCPGTK EMYSNANVQN HNNPEDMYVS HRGVVYDITN FARSNHGSAS | 1020 |
LPATTDTMQT LAGLDVSWTI PPPLTSACEG LVTSPSVTIQ PNQTIELGPF VHYSGDQLQQ | 1080 |
TSITAMKDQS WYWNTFLPQM KLYKKGHIVQ DMNTIADDYK GWTRYAMAIN GKVYDLTDYF | 1140 |
TTADRYASGS TAGDYSFLDD AVEEIFKKFS GTDGTDNWNK YTAALSPDVL AANMNCLNNM | 1200 |
FYIGDVDERE SVRCTFTNYL LLAFALVMCL TILIKFLAAL QFGSAPTPED HDKFVICQVP | 1260 |
CYTEDEESLK KTIDSLTVMN YDDKRKLLFI IADGMVMGGG NDRPTPRIVL DVLGYDTKND | 1320 |
PEPLMFKSIG EGSKQLNYGK VYSGLYECEG HVVPYIVIVK VGKASERAKP GNRGKRDSQL | 1380 |
ICMNFLNKVH FDGEMTPLEL EMYHQIKNVI GVNPSFYEYV LMVDSDTEVD TNALNHLIST | 1440 |
MLHDGSIIGL CGETRLVNED RSLTTMIQVY EYYISHHLAK AFESLFGSVT CLPGCFCMYR | 1500 |
IRTPVKNEPL INSPKVIGDY SDNNVDTLHK KNLLHLGEDR YLTTLMMKHF PQYKMKFTPH | 1560 |
AFCKTVAPDR IRVLVSQRRR WINSTIHNLF ELILLPDLCG FCCFSMRFVV LIDLIGTLTL | 1620 |
PVSVVYLVYL IYVIADKSQP LPILSLAMLA GMYGLQAILF ILKRQWQHIG WMIFYICAIP | 1680 |
IFSFALPIYS FWHFDDFSWG NTRIVVGDKK QKKIIVNDDE KFDDKMIPLK KWSVYEQELW | 1740 |
EMGSTGSRET GVTGHSYRSY YSQGGTPMNN MPPNMMGGAG GAPTGTGSVI YDGRSMYGGG | 1800 |
SVIYDGNRSM YGGGHNGSQD FMDGGMRPGS RMMPPGGPGS VMGMPGYTGS VMGAPGYTGS | 1860 |
MMAPPMAGYT GSMMMAPQPG GYAGSVIGSE YGGAGPQDHL MAQHQQRGSF MPHQQPPYQ | 1919 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.