CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CCH63144.1

Basic Information

GenBank IDCCH63144.1
FamilyCBM21
Sequence Length579
UniProt IDI2H9U2(100,100)Download
Average pLDDT?51.14
CAZy50 ID55242
CAZy50 RepYes, CCH63144.1
Structure ClusterSC_CBM21_clus5
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1071380
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilySaccharomycetaceae
GenusTetrapisispora
SpeciesTetrapisispora blattae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MARHFIMQNH  INATVSTLPE  RSLSSESKTP  SQDPSNINSS  SKCSSTSSSN  SNIMFRQFNS60
ATHPDFLYNK  TNPSTSSSAA  GVISHKPASS  NINSLDFLRK  PKRLPTLHSQ  WDDQTILERN120
TLRNKDPRWN  SNSSLSLNTS  SNDSPIKKDF  SFKDLDEAND  DMFFHQTPLQ  GPGEDDNTSN180
QNSSISPRTK  TTKNYITGIS  GTVTNDTGDI  RLNLLHSLDT  ATGVGDEIPV  YKKSGELLKP240
SLKKRSKSLP  TTPNILNSNS  SKLNTTRHPK  MERSKSVHFD  EKAPFKLFEK  DDSPIRIINY300
KENIDQLDFW  NYNKPLTMQD  YSNTTETLLT  DLQMFNMNDN  DLLLRSNGNT  NIFSAPPIKP360
LRKSKKFTNA  AASTISNPKR  RGNTNGNSNG  NIIRSNEVSP  KSLSNGSTNR  SNSSGHLHKV420
AGLYSTNFPI  LSNKNPKSLK  LNIFVNLSQD  KKCFLQDLTL  YNTNNNSFGN  SHTLIIGKVL480
VKNIFFHKRV  IIKYTWNKWK  TFHDIESVYL  SDADGILPGT  NMDIFNFIID  DSVNNVSSDG540
RKGMLEFCIR  YISIDDANGG  NLEFWDNNGG  KNYKVDVII579

Predicted 3D structure by AlphaFold2 with pLDDT = 51.14 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MARHFIMQNH  INATVSTLPE  RSLSSESKTP  SQDPSNINSS  SKCSSTSSSN  SNIMFRQFNS60
ATHPDFLYNK  TNPSTSSSAA  GVISHKPASS  NINSLDFLRK  PKRLPTLHSQ  WDDQTILERN120
TLRNKDPRWN  SNSSLSLNTS  SNDSPIKKDF  SFKDLDEAND  DMFFHQTPLQ  GPGEDDNTSN180
QNSSISPRTK  TTKNYITGIS  GTVTNDTGDI  RLNLLHSLDT  ATGVGDEIPV  YKKSGELLKP240
SLKKRSKSLP  TTPNILNSNS  SKLNTTRHPK  MERSKSVHFD  EKAPFKLFEK  DDSPIRIINY300
KENIDQLDFW  NYNKPLTMQD  YSNTTETLLT  DLQMFNMNDN  DLLLRSNGNT  NIFSAPPIKP360
LRKSKKFTNA  AASTISNPKR  RGNTNGNSNG  NIIRSNEVSP  KSLSNGSTNR  SNSSGHLHKV420
AGLYSTNFPI  LSNKNPKSLK  LNIFVNLSQD  KKCFLQDLTL  YNTNNNSFGN  SHTLIIGKVL480
VKNIFFHKRV  IIKYTWNKWK  TFHDIESVYL  SDADGILPGT  NMDIFNFIID  DSVNNVSSDG540
RKGMLEFCIR  YISIDDANGG  NLEFWDNNGG  KNYKVDVII579

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM21(452-575)

MARHFIMQNH  INATVSTLPE  RSLSSESKTP  SQDPSNINSS  SKCSSTSSSN  SNIMFRQFNS60
ATHPDFLYNK  TNPSTSSSAA  GVISHKPASS  NINSLDFLRK  PKRLPTLHSQ  WDDQTILERN120
TLRNKDPRWN  SNSSLSLNTS  SNDSPIKKDF  SFKDLDEAND  DMFFHQTPLQ  GPGEDDNTSN180
QNSSISPRTK  TTKNYITGIS  GTVTNDTGDI  RLNLLHSLDT  ATGVGDEIPV  YKKSGELLKP240
SLKKRSKSLP  TTPNILNSNS  SKLNTTRHPK  MERSKSVHFD  EKAPFKLFEK  DDSPIRIINY300
KENIDQLDFW  NYNKPLTMQD  YSNTTETLLT  DLQMFNMNDN  DLLLRSNGNT  NIFSAPPIKP360
LRKSKKFTNA  AASTISNPKR  RGNTNGNSNG  NIIRSNEVSP  KSLSNGSTNR  SNSSGHLHKV420
AGLYSTNFPI  LSNKNPKSLK  LNIFVNLSQD  KKCFLQDLTL  YNTNNNSFGN  SHTLIIGKVL480
VKNIFFHKRV  IIKYTWNKWK  TFHDIESVYL  SDADGILPGT  NMDIFNFIID  DSVNNVSSDG540
RKGMLEFCIR  YISIDDANGG  NLEFWDNNGG  KNYKVDVII579

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help