Information for CAZyme ID: CCH30389.1
Basic Information
GenBank ID | CCH30389.1 |
Family | CBM35 |
Sequence Length | 1004 |
UniProt ID | K0K0G9(100,100)![]() |
Average pLDDT? | 80.67 |
CAZy50 ID | 14149 |
CAZy50 Rep | Yes, CCH30389.1 |
Structure Cluster | SC_CBM35_clus47 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1179773 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Pseudonocardiales |
Family | Pseudonocardiaceae |
Genus | Saccharothrix |
Species | Saccharothrix espanaensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MAPRPLSAAL AAATVFALLS APGTALAAPP QPAADHPSAD HPAGSPSTPG SASEAVRVDR | 60 |
GAGITAVRYE AESAALDHAA VESNHIGFSG PGFVNFDNVA GSHAEFTVTA DRAGPATLTL | 120 |
RYANGSAADR PMGLAVNGTA AGDRPFAATG GWTTWQSVTA PVTLVAGANR VRLTSATGTG | 180 |
GPNLDHLELE QAATDYQAES AALDRAAVES DHAGFTGTGF VDYDNVAGSR VDYTVTADRA | 240 |
GPHALTFRYA NGTDVDRPLS VTVDGGQATP AAFPGTGAWT TWREVTVTAT LKAGRNRIRA | 300 |
AATTANGGPN ADRLTVAPTG PADTEAPAPP PNLRATGKTA TTTSLAWDAA TDNVGVVGYD | 360 |
VYQHGQLMKS VDGATLATTV GGLAPDTEYD WTVFARDAAP NVSPASNNVL VRTDQAPPDG | 420 |
EAPSTPADLR ATGRTATSVD LAWTASTDNV GVTGYQVFRD GAQAGTSDGP ATTVGGLTSG | 480 |
TAYRFTVRAR DAAGNLSPFG NEVTATPGGS GPAGVPNPGA VTTILSGTDV PWGLAFLPDG | 540 |
SALLTERETF TVYKLSETGT RTNLGKVPGA QNTNGEGGVL GIEVSPTFAS DGYVFIYHTA | 600 |
AAGNQLVRAK LTGTTLGGWT TLLSGVPKSR YHNGGRLRFS PDGKHLFVST GDAQNKANAQ | 660 |
NLNTNAGKIL RLDPDGSIPA DNPYPGKAVW SFGHRNVQGL DFDSQGRLWA SEFGDSTTDE | 720 |
VNLIQKAGNF GWPDCEGTSG GGCAGTIAPK KSWSTSVASP SGLTIVNDHV FVATTVGQRI | 780 |
YRMRIDPSAN LVDQQVYFQG TYNRLRTVEV DRDGDLWLTT STDKDGTANN DRVLHIDVVY | 840 |
AGGFSLTSSA FADNAMIPAK HTCAGDGTAG QDPSPPLAWT GASGAKGYAV VFADRADNGT | 900 |
KLHWAIWDIP ASARSLPENL GAGFAVPGQG GAKQKAMGSG ANAQKYFGPC PGGSTNPYTF | 960 |
TLYALNTATV PGLSSSSTMA QVETAIKNAS TANTVLRGRS NAST | 1004 |
Predicted 3D structure by AlphaFold2 with pLDDT = 80.67 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MAPRPLSAAL AAATVFALLS APGTALAAPP QPAADHPSAD HPAGSPSTPG SASEAVRVDR | 60 |
GAGITAVRYE AESAALDHAA VESNHIGFSG PGFVNFDNVA GSHAEFTVTA DRAGPATLTL | 120 |
RYANGSAADR PMGLAVNGTA AGDRPFAATG GWTTWQSVTA PVTLVAGANR VRLTSATGTG | 180 |
GPNLDHLELE QAATDYQAES AALDRAAVES DHAGFTGTGF VDYDNVAGSR VDYTVTADRA | 240 |
GPHALTFRYA NGTDVDRPLS VTVDGGQATP AAFPGTGAWT TWREVTVTAT LKAGRNRIRA | 300 |
AATTANGGPN ADRLTVAPTG PADTEAPAPP PNLRATGKTA TTTSLAWDAA TDNVGVVGYD | 360 |
VYQHGQLMKS VDGATLATTV GGLAPDTEYD WTVFARDAAP NVSPASNNVL VRTDQAPPDG | 420 |
EAPSTPADLR ATGRTATSVD LAWTASTDNV GVTGYQVFRD GAQAGTSDGP ATTVGGLTSG | 480 |
TAYRFTVRAR DAAGNLSPFG NEVTATPGGS GPAGVPNPGA VTTILSGTDV PWGLAFLPDG | 540 |
SALLTERETF TVYKLSETGT RTNLGKVPGA QNTNGEGGVL GIEVSPTFAS DGYVFIYHTA | 600 |
AAGNQLVRAK LTGTTLGGWT TLLSGVPKSR YHNGGRLRFS PDGKHLFVST GDAQNKANAQ | 660 |
NLNTNAGKIL RLDPDGSIPA DNPYPGKAVW SFGHRNVQGL DFDSQGRLWA SEFGDSTTDE | 720 |
VNLIQKAGNF GWPDCEGTSG GGCAGTIAPK KSWSTSVASP SGLTIVNDHV FVATTVGQRI | 780 |
YRMRIDPSAN LVDQQVYFQG TYNRLRTVEV DRDGDLWLTT STDKDGTANN DRVLHIDVVY | 840 |
AGGFSLTSSA FADNAMIPAK HTCAGDGTAG QDPSPPLAWT GASGAKGYAV VFADRADNGT | 900 |
KLHWAIWDIP ASARSLPENL GAGFAVPGQG GAKQKAMGSG ANAQKYFGPC PGGSTNPYTF | 960 |
TLYALNTATV PGLSSSSTMA QVETAIKNAS TANTVLRGRS NAST | 1004 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.