CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CCA70820.1

Basic Information

GenBank IDCCA70820.1
FamilyCE16
Sequence Length339
UniProt IDG4THM7(100,100)Download
Average pLDDT?79.10
CAZy50 ID137395
CAZy50 RepYes, CCA70820.1
Structure ClusterSC_CE16_clus13
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1109443
KingdomEukaryota
PhylumBasidiomycota
ClassAgaricomycetes
OrderSebacinales
FamilySerendipitaceae
GenusSerendipita
SpeciesSerendipita indica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPAFNGLVGS  SIDNIHVDPP  DQLAEAPPSP  SWAILAPKEA  CKWKGFGSIR  YLFIFGGSYS60
STCIPSSLPT  LEPTDEEPLG  VPFPGITSTE  PGTPNWVGHF  VTEYALSPLL  VYNYATLGSA120
IPDVTLQIDK  YFLGDSGPSS  KGVPWTAENS  LFITWVGLQD  LAISADLEEP  MDELFRGQAK180
LYAAGARNFL  LINLPPIHRA  PACTIMEMYG  VVDDDREASI  LRASTRILDW  NTYLAMRARL240
FASPAPVPLT  PFYAPDLVFD  PNARPPVATA  SQQVYTGASV  MLFSCYESMS  MILDNAKAFG300
LVETDLQKIG  GSIWVDHIHP  TSVVHDLIAR  DLSRFIGKI339

Predicted 3D structure by AlphaFold2 with pLDDT = 79.10 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MPAFNGLVGS  SIDNIHVDPP  DQLAEAPPSP  SWAILAPKEA  CKWKGFGSIR  YLFIFGGSYS60
STCIPSSLPT  LEPTDEEPLG  VPFPGITSTE  PGTPNWVGHF  VTEYALSPLL  VYNYATLGSA120
IPDVTLQIDK  YFLGDSGPSS  KGVPWTAENS  LFITWVGLQD  LAISADLEEP  MDELFRGQAK180
LYAAGARNFL  LINLPPIHRA  PACTIMEMYG  VVDDDREASI  LRASTRILDW  NTYLAMRARL240
FASPAPVPLT  PFYAPDLVFD  PNARPPVATA  SQQVYTGASV  MLFSCYESMS  MILDNAKAFG300
LVETDLQKIG  GSIWVDHIHP  TSVVHDLIAR  DLSRFIGKI339

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE16(52-332)

MPAFNGLVGS  SIDNIHVDPP  DQLAEAPPSP  SWAILAPKEA  CKWKGFGSIR  YLFIFGGSYS60
STCIPSSLPT  LEPTDEEPLG  VPFPGITSTE  PGTPNWVGHF  VTEYALSPLL  VYNYATLGSA120
IPDVTLQIDK  YFLGDSGPSS  KGVPWTAENS  LFITWVGLQD  LAISADLEEP  MDELFRGQAK180
LYAAGARNFL  LINLPPIHRA  PACTIMEMYG  VVDDDREASI  LRASTRILDW  NTYLAMRARL240
FASPAPVPLT  PFYAPDLVFD  PNARPPVATA  SQQVYTGASV  MLFSCYESMS  MILDNAKAFG300
LVETDLQKIG  GSIWVDHIHP  TSVVHDLIAR  DLSRFIGKI339

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help