Information for CAZyme ID: CAG5103068.1
Basic Information
| GenBank ID | CAG5103068.1 |
| Family | GT31 |
| Sequence Length | 665 |
| UniProt ID | CAG5103068.1(MOD) |
| Average pLDDT? | 71.93 |
| CAZy50 ID | 43034 |
| CAZy50 Rep | Yes, CAG5103068.1 |
| Structure Cluster | SC_GT31_clus164 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 34765 |
| Kingdom | Eukaryota |
| Phylum | Chordata |
| Class | Appendicularia |
| Order | Copelata |
| Family | Oikopleuridae |
| Genus | Oikopleura |
| Species | Oikopleura dioica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MEALLTKRLN YCLYLLLLLY VTSPDEQDGS NELQFWVFHE GVTISNCIKD PVTIECFRFS | 60 |
| SLESAKLACA EKDECNGVSE VIENELGFFE LRKGPDVVSA EFNSWVMYRR NCDGWDKENT | 120 |
| LNVSEVESLY PDLRGQRRLN NERNCVYTGM FSHLNKLFKF DPDRQPEALI SPLPCEDETI | 180 |
| IFGIKSLPRS SQMRQALRDT WLQPEIWNWL HYRIKVVFLI AQAEEEVDLS DEILEKGDIL | 240 |
| LLDFQESLYN LPFKDIAFLR FIEKSCKNVD YVFKGDDDIL LKRVENEKEF RERSRRVTMS | 300 |
| ASYSSISQSK KVPQNFAREI AAIRSSQRSV EGIGCLKKGA LPIRDTSSKY FMPEQMYDAD | 360 |
| EFSSYFSGAA YVTTRNLALA MENAIERTQV LPMDDVYVGD LIQNAGKQEK LKRSAGICSG | 420 |
| LNPQGIVVDN PCLLRGLSVA HKYTDPELMR EMFRLAVSDA ECSEKEIAHL ENNLSFFLAK | 480 |
| ESGDAVQSWT IDAGKRKSRK KSEVKEIELK QMSTEEEEIK ALFELFDNDG DRTINLSELE | 540 |
| TVMKTIGCHP PSKEEIKKLM LDFDEDGNEV IDFEEFQKMM LVHKENHPEN PASQLNQAVQ | 600 |
| YFDKNNLGAL PMSKLKNIMT ELGEEPLFDD EFKCFAEFLQ AANSKTAEEE VDLKHFKEFL | 660 |
| LLSGQ | 665 |
Predicted 3D structure by AlphaFold2 with pLDDT = 71.93 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MEALLTKRLN YCLYLLLLLY VTSPDEQDGS NELQFWVFHE GVTISNCIKD PVTIECFRFS | 60 |
| SLESAKLACA EKDECNGVSE VIENELGFFE LRKGPDVVSA EFNSWVMYRR NCDGWDKENT | 120 |
| LNVSEVESLY PDLRGQRRLN NERNCVYTGM FSHLNKLFKF DPDRQPEALI SPLPCEDETI | 180 |
| IFGIKSLPRS SQMRQALRDT WLQPEIWNWL HYRIKVVFLI AQAEEEVDLS DEILEKGDIL | 240 |
| LLDFQESLYN LPFKDIAFLR FIEKSCKNVD YVFKGDDDIL LKRVENEKEF RERSRRVTMS | 300 |
| ASYSSISQSK KVPQNFAREI AAIRSSQRSV EGIGCLKKGA LPIRDTSSKY FMPEQMYDAD | 360 |
| EFSSYFSGAA YVTTRNLALA MENAIERTQV LPMDDVYVGD LIQNAGKQEK LKRSAGICSG | 420 |
| LNPQGIVVDN PCLLRGLSVA HKYTDPELMR EMFRLAVSDA ECSEKEIAHL ENNLSFFLAK | 480 |
| ESGDAVQSWT IDAGKRKSRK KSEVKEIELK QMSTEEEEIK ALFELFDNDG DRTINLSELE | 540 |
| TVMKTIGCHP PSKEEIKKLM LDFDEDGNEV IDFEEFQKMM LVHKENHPEN PASQLNQAVQ | 600 |
| YFDKNNLGAL PMSKLKNIMT ELGEEPLFDD EFKCFAEFLQ AANSKTAEEE VDLKHFKEFL | 660 |
| LLSGQ | 665 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.