Information for CAZyme ID: CAE6062859.1
Basic Information
GenBank ID | CAE6062859.1 |
Family | GH16_20 |
Sequence Length | 799 |
UniProt ID | A0A8S2AAI5(100,100)![]() |
Average pLDDT? | 76.73 |
CAZy50 ID | 27438 |
CAZy50 Rep | Yes, CAE6062859.1 |
Structure Cluster | SC_GH16_clus331 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 38785 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Brassicales |
Family | Brassicaceae |
Genus | Arabidopsis |
Species | Arabidopsis arenosa |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
METLSRLLVF MSLFSGLVSG FALQNLPITS FEEGYTQLFG DKNLFVHKDG KSVRLTLDER | 60 |
TGSGFVSNDL YLHGFFSASI KLPSDYSAGV VVAFYMSNGD MYEKNHDEID FEFLGNIRGK | 120 |
EWRIQTNIYG NGSTHLGREE RYNLWFDPTE DFHQYSILWS DSYIIFFVDN VPIREVKRTA | 180 |
AMGGDFPSKP MSLYTTIWDG SKWATDGGKY GVNYKYAPYI ARFSDLVLHG CPVDPIEQFP | 240 |
RCDEGAAEDI RAAQEITPSQ RSKMDVFRRK HMTYSYCYDR TRYKVALSEC VVNPAEAQRL | 300 |
RVYDPVTFGG IPRRHRNGKH RSKRSRVDGT ESLGNIGVTR VNASQRNHSK KLTKNLRNPR | 360 |
RTKLPPDFGV NLYLRKPKIE PVVDDYNDDD DGDVQDQESV DDDAVVWEPE EIEAISSLFQ | 420 |
KRIPQKPGKP IRVRPLPLPQ PHKLRPLGLP TPKKNIRSAA LSSVSKQVYK DPSFLIGLAR | 480 |
EIKSLPSSDA DVSLVLNKWV SFLRKGSLSM TIRELGHMGL PERALQTYHW AEKHSHLVPD | 540 |
NRILASTIQV LAKHHELKLL KFDNSLASKN VIEAMIKGCI EGGWLNLARK LILISKSNNR | 600 |
ILDSSIYVKM ILEIAKNPDK YHLVVTLLEE LKEREDLKLS QQDCTGIMKI CVKLGEFELV | 660 |
ESLFDWFKES NREPSVVMYT TMIHSRYSEQ KYREAMNVVW EMEESNCLLD LPAYRVVIKL | 720 |
FVALDDLGRA MRYYSKLKEA GFSPTYDIYR DMINVYTASG RLTKCKEICK EVEDAGLRLD | 780 |
KDTLFMLLQL EKQTMSLLH | 799 |
Predicted 3D structure by AlphaFold2 with pLDDT = 76.73 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
METLSRLLVF MSLFSGLVSG FALQNLPITS FEEGYTQLFG DKNLFVHKDG KSVRLTLDER | 60 |
TGSGFVSNDL YLHGFFSASI KLPSDYSAGV VVAFYMSNGD MYEKNHDEID FEFLGNIRGK | 120 |
EWRIQTNIYG NGSTHLGREE RYNLWFDPTE DFHQYSILWS DSYIIFFVDN VPIREVKRTA | 180 |
AMGGDFPSKP MSLYTTIWDG SKWATDGGKY GVNYKYAPYI ARFSDLVLHG CPVDPIEQFP | 240 |
RCDEGAAEDI RAAQEITPSQ RSKMDVFRRK HMTYSYCYDR TRYKVALSEC VVNPAEAQRL | 300 |
RVYDPVTFGG IPRRHRNGKH RSKRSRVDGT ESLGNIGVTR VNASQRNHSK KLTKNLRNPR | 360 |
RTKLPPDFGV NLYLRKPKIE PVVDDYNDDD DGDVQDQESV DDDAVVWEPE EIEAISSLFQ | 420 |
KRIPQKPGKP IRVRPLPLPQ PHKLRPLGLP TPKKNIRSAA LSSVSKQVYK DPSFLIGLAR | 480 |
EIKSLPSSDA DVSLVLNKWV SFLRKGSLSM TIRELGHMGL PERALQTYHW AEKHSHLVPD | 540 |
NRILASTIQV LAKHHELKLL KFDNSLASKN VIEAMIKGCI EGGWLNLARK LILISKSNNR | 600 |
ILDSSIYVKM ILEIAKNPDK YHLVVTLLEE LKEREDLKLS QQDCTGIMKI CVKLGEFELV | 660 |
ESLFDWFKES NREPSVVMYT TMIHSRYSEQ KYREAMNVVW EMEESNCLLD LPAYRVVIKL | 720 |
FVALDDLGRA MRYYSKLKEA GFSPTYDIYR DMINVYTASG RLTKCKEICK EVEDAGLRLD | 780 |
KDTLFMLLQL EKQTMSLLH | 799 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.