Information for CAZyme ID: CAD7252129.1
Basic Information
GenBank ID | CAD7252129.1 |
Family | CBM14 |
Sequence Length | 1910 |
UniProt ID | A0A7R9AE03(100,100)![]() |
Average pLDDT? | 46.81 |
CAZy50 ID | 1761 |
CAZy50 Rep | Yes, CAD7252129.1 |
Structure Cluster | SC_CBM14_clus8 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 69355 |
Kingdom | Eukaryota |
Phylum | Arthropoda |
Class | Ostracoda |
Order | Podocopida |
Family | Darwinulidae |
Genus | Darwinula |
Species | Darwinula stevensoni |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTDARQESND CGIYNPLDLE FQRRRRMSRR NMNSSVSGLA RRSKMDWIVR VMPIVLGCLP | 60 |
SLGQGLPPRK SSIGTSETES ERGILPIVRV SAHHEQICKY ESVDPESVVV RSGFEEAEKR | 120 |
QILEIHNGSR RRVASGAEKA PNLDRKHKES VWDSEQTRIA RRRSDRCCDF ERPHDEEDRP | 180 |
LTRPEWSHST QNVFWAFGSP RVESPWQLAL WKRYEEAKHF PNETVAGFRR SEEGGIGYYT | 240 |
AMIWADSRCL GCGATVYSPA PAGSECDRMS SGCPEHKYSC SAPGLFPHPT SWDLYYECKG | 300 |
KGEEGALRSC SPQVVFDPGQ RACLYKEGEV RRKRDATSRC YSEGLFRLGR SCSRYYKCTK | 360 |
KKFAAGMPRP WEQKSRMDDG DPFTFGVGHQ ERQKRDVHVP WWNRFFSSFV GVQPQQSNQI | 420 |
RSRVERASHN SIPDKREDFE LTQHICPEEN LFDDHAGRCV PRASLNRWLD CDEDTSSETS | 480 |
SESRRHVTRQ APEVRCTEAG FFLQPGTCTK FYRCVDFLGS GVHFTVFHFD CGPGTVFDDR | 540 |
YNVCNHPQNV PNLQCAEGEL EAAVGEPEPT GAGSQDSVEQ QPNTGQQGPE RRTTDQKAPG | 600 |
LPSPRQPGPE QPSPSKQGSE QSHRPQQGSG KPSPPQEESA KPSPQKGSVK PSPQKGSGKP | 660 |
SPPQQESAKP SPPRKESGQS RRPPQESGKP TPPPQGSGQT QPYPGQKGIA SEVTDQMKIR | 720 |
QDTTAAVSSP RNPKVNCTEA GFFPVPQSCQ RFYRCVDWVG DGSSFSVFFF ICGPGTVFND | 780 |
ELDVCVHPGN VAEQCPPEEQ DLGVAEPEPE GQPEPGVGDG TVVQPSTSTR RPSTSTVRPS | 840 |
TSTRRPSTST VRPSTSTRRP STSTVRPSTS TRRPSTSTRR PSTSTRRPGT TAAASSSEES | 900 |
DEMPTTPRPN LPDGSIPFSS SIKVDCTAAG LFQVPGSCIN FYQCVDWYGN GTVFSSFFFT | 960 |
CAPGTVFQED IQTCIAFETL PNPMDCPDHE LEQLTSPQPE PDGDDGSTLP APEPMFTPPP | 1020 |
VKVFCTEPGL FRLPGSCVMS YRCVDWFGNG TFSVYYFCCP PGTVFDDILD ICNYPWSIQP | 1080 |
PLMCNPDGSI MNMTEAQIGS TTPTTTTRRT ATQTSTGTTA ESSESEESTE SDSATEETSD | 1140 |
ESSSSEESEE SEEESSEEVS PRPSTTTRRT TTMRSTRRTT TTRPTTTRRP TTTRRPTTTR | 1200 |
RPTTTRRPTT TRRPTTTRRP TTTRRPTTTR RPTTTRRPTT TRRPTTTRRP TTTRRPTTTR | 1260 |
RPTTSSTTTT RSTIREPPEC TEAGFFRVPG TCRDFYRCVD IYGDGLDFKV FPISCPGGTV | 1320 |
FNEAVNTCTA PELVQPPLEC PEDDTTTSGT ESTPPRASTE TGTTETSSAE SSEETTSTGA | 1380 |
ETSTTDTDAT TSVTSTDVAS TSESGETTDL TSTTGSDATT DATTDATTDA TTESPTKSSP | 1440 |
DNVTCTEEGF FPLPGSCKKF YRCVSNEETG EFTAHHFNCG PGTAFDDALN VCNHIASIQP | 1500 |
PLMCPDEDAD ADPEPEPEAE PASVPLLDRP KVNCTEPGFF RLPGSCNLFY RCVDWFGNGT | 1560 |
AFSVFHFDCP EGLHFHEGNN TCNFPELIQP PCEENATEAT SAEQTDSTPA ESTTTAESTS | 1620 |
AETISESEST TEGSTTETRE STTAETTSES TTAPTTQTTE TSTEITESTT ETSTESTTET | 1680 |
SAESTTETST ESTTETSAES TTETSAESTT EISAESTTET SAESTTEISA ESTTETSTES | 1740 |
TTETSAESTT ETSTESTTET STESTTETSA ESTTETPTES TTETSAESTT ETPTESTTET | 1800 |
STDASTESTT ETSAESTTET PTESTTETST DASTETTETT LEPLTTTMMP MINFSLLCGT | 1860 |
KRNHRHPVHC NRFYTCIWDG WNFEFVVGQC GAGDVYDQTS DSCVDEADAP | 1910 |
Predicted 3D structure by AlphaFold2 with pLDDT = 46.81 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MTDARQESND CGIYNPLDLE FQRRRRMSRR NMNSSVSGLA RRSKMDWIVR VMPIVLGCLP | 60 |
SLGQGLPPRK SSIGTSETES ERGILPIVRV SAHHEQICKY ESVDPESVVV RSGFEEAEKR | 120 |
QILEIHNGSR RRVASGAEKA PNLDRKHKES VWDSEQTRIA RRRSDRCCDF ERPHDEEDRP | 180 |
LTRPEWSHST QNVFWAFGSP RVESPWQLAL WKRYEEAKHF PNETVAGFRR SEEGGIGYYT | 240 |
AMIWADSRCL GCGATVYSPA PAGSECDRMS SGCPEHKYSC SAPGLFPHPT SWDLYYECKG | 300 |
KGEEGALRSC SPQVVFDPGQ RACLYKEGEV RRKRDATSRC YSEGLFRLGR SCSRYYKCTK | 360 |
KKFAAGMPRP WEQKSRMDDG DPFTFGVGHQ ERQKRDVHVP WWNRFFSSFV GVQPQQSNQI | 420 |
RSRVERASHN SIPDKREDFE LTQHICPEEN LFDDHAGRCV PRASLNRWLD CDEDTSSETS | 480 |
SESRRHVTRQ APEVRCTEAG FFLQPGTCTK FYRCVDFLGS GVHFTVFHFD CGPGTVFDDR | 540 |
YNVCNHPQNV PNLQCAEGEL EAAVGEPEPT GAGSQDSVEQ QPNTGQQGPE RRTTDQKAPG | 600 |
LPSPRQPGPE QPSPSKQGSE QSHRPQQGSG KPSPPQEESA KPSPQKGSVK PSPQKGSGKP | 660 |
SPPQQESAKP SPPRKESGQS RRPPQESGKP TPPPQGSGQT QPYPGQKGIA SEVTDQMKIR | 720 |
QDTTAAVSSP RNPKVNCTEA GFFPVPQSCQ RFYRCVDWVG DGSSFSVFFF ICGPGTVFND | 780 |
ELDVCVHPGN VAEQCPPEEQ DLGVAEPEPE GQPEPGVGDG TVVQPSTSTR RPSTSTVRPS | 840 |
TSTRRPSTST VRPSTSTRRP STSTVRPSTS TRRPSTSTRR PSTSTRRPGT TAAASSSEES | 900 |
DEMPTTPRPN LPDGSIPFSS SIKVDCTAAG LFQVPGSCIN FYQCVDWYGN GTVFSSFFFT | 960 |
CAPGTVFQED IQTCIAFETL PNPMDCPDHE LEQLTSPQPE PDGDDGSTLP APEPMFTPPP | 1020 |
VKVFCTEPGL FRLPGSCVMS YRCVDWFGNG TFSVYYFCCP PGTVFDDILD ICNYPWSIQP | 1080 |
PLMCNPDGSI MNMTEAQIGS TTPTTTTRRT ATQTSTGTTA ESSESEESTE SDSATEETSD | 1140 |
ESSSSEESEE SEEESSEEVS PRPSTTTRRT TTMRSTRRTT TTRPTTTRRP TTTRRPTTTR | 1200 |
RPTTTRRPTT TRRPTTTRRP TTTRRPTTTR RPTTTRRPTT TRRPTTTRRP TTTRRPTTTR | 1260 |
RPTTSSTTTT RSTIREPPEC TEAGFFRVPG TCRDFYRCVD IYGDGLDFKV FPISCPGGTV | 1320 |
FNEAVNTCTA PELVQPPLEC PEDDTTTSGT ESTPPRASTE TGTTETSSAE SSEETTSTGA | 1380 |
ETSTTDTDAT TSVTSTDVAS TSESGETTDL TSTTGSDATT DATTDATTDA TTESPTKSSP | 1440 |
DNVTCTEEGF FPLPGSCKKF YRCVSNEETG EFTAHHFNCG PGTAFDDALN VCNHIASIQP | 1500 |
PLMCPDEDAD ADPEPEPEAE PASVPLLDRP KVNCTEPGFF RLPGSCNLFY RCVDWFGNGT | 1560 |
AFSVFHFDCP EGLHFHEGNN TCNFPELIQP PCEENATEAT SAEQTDSTPA ESTTTAESTS | 1620 |
AETISESEST TEGSTTETRE STTAETTSES TTAPTTQTTE TSTEITESTT ETSTESTTET | 1680 |
SAESTTETST ESTTETSAES TTETSAESTT EISAESTTET SAESTTEISA ESTTETSTES | 1740 |
TTETSAESTT ETSTESTTET STESTTETSA ESTTETPTES TTETSAESTT ETPTESTTET | 1800 |
STDASTESTT ETSAESTTET PTESTTETST DASTETTETT LEPLTTTMMP MINFSLLCGT | 1860 |
KRNHRHPVHC NRFYTCIWDG WNFEFVVGQC GAGDVYDQTS DSCVDEADAP | 1910 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.