Information for CAZyme ID: CAD7246088.1
Basic Information
GenBank ID | CAD7246088.1 |
Family | GH30_1 |
Sequence Length | 511 |
UniProt ID | A0A7R8X8M4(100,100)![]() |
Average pLDDT? | 85.51 |
CAZy50 ID | 66576 |
CAZy50 Rep | Yes, CAD7246088.1 |
Structure Cluster | SC_GH30_clus73 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 69355 |
Kingdom | Eukaryota |
Phylum | Arthropoda |
Class | Ostracoda |
Order | Podocopida |
Family | Darwinulidae |
Genus | Darwinula |
Species | Darwinula stevensoni |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLLFFAKKFA RPLSLEWYNI ARREETTPFA PERRIPSRVP STDETTTRTR VRVNRQEEYQ | 60 |
SLLGFGGAFT DAAGLNIKSL EPAAQELIIR SYFAPEGIRY NIGRIPMGGS DFSTRPYSYD | 120 |
DVEGDEAFEF WSLAFEDLEY KIPLVHLARE VSEEEVLLFG SAWSAPRWMK TNNDFIGEGR | 180 |
LKDEYYQLWA DYFIKFLEAY SAAGLDMWGL TAGNEPTNGN IPGFSFNCMG WTPETQRKWV | 240 |
AENLGPTLRA AGYGKDNLTL MVFDDQRAYV ETWLPTILGD PVIGEYVSGW AVHWYWNWLF | 300 |
GPEILDGAHA DYPDFWILAT EACEGSDLGE PPVSLGNWLY AESYAHNIIE DLNHWVRGWV | 360 |
DWNLALDLEG GPNWAANEVD AGIIVNATAG EFYKNPIFYA LGHFSKFIPR GSVRLGLEVA | 420 |
GAVEALATST PEGDVVVVLL NTPLAASSAI DYRSARSRLS IDDRIEMYVS LVRFDRSGAE | 480 |
QVVEIEDGDR FVSHTMPAKS LVTLLWSTSV E | 511 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.51 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MLLFFAKKFA RPLSLEWYNI ARREETTPFA PERRIPSRVP STDETTTRTR VRVNRQEEYQ | 60 |
SLLGFGGAFT DAAGLNIKSL EPAAQELIIR SYFAPEGIRY NIGRIPMGGS DFSTRPYSYD | 120 |
DVEGDEAFEF WSLAFEDLEY KIPLVHLARE VSEEEVLLFG SAWSAPRWMK TNNDFIGEGR | 180 |
LKDEYYQLWA DYFIKFLEAY SAAGLDMWGL TAGNEPTNGN IPGFSFNCMG WTPETQRKWV | 240 |
AENLGPTLRA AGYGKDNLTL MVFDDQRAYV ETWLPTILGD PVIGEYVSGW AVHWYWNWLF | 300 |
GPEILDGAHA DYPDFWILAT EACEGSDLGE PPVSLGNWLY AESYAHNIIE DLNHWVRGWV | 360 |
DWNLALDLEG GPNWAANEVD AGIIVNATAG EFYKNPIFYA LGHFSKFIPR GSVRLGLEVA | 420 |
GAVEALATST PEGDVVVVLL NTPLAASSAI DYRSARSRLS IDDRIEMYVS LVRFDRSGAE | 480 |
QVVEIEDGDR FVSHTMPAKS LVTLLWSTSV E | 511 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.