CAZyme3D

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Entry ID

Information for CAZyme ID: CAD7079715.1

Basic Information

GenBank IDCAD7079715.1
FamilyCBM20
Sequence Length747
UniProt IDA0A7R8UF79(100,100)Download
Average pLDDT?79.04
CAZy50 ID33107
CAZy50 RepYes, CAD7079715.1
Structure ClusterSC_CBM20_clus82
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID343691
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderDiptera
FamilyStratiomyidae
GenusHermetia
SpeciesHermetia illucens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MERGGHPVYL  NFKKIVSYPI  SSFALYPSFK  KSKDKVQPTK  MQRWFFMDDN  EILESDASSA60
ASSRSKKTLE  SSGEEREWTF  KVVMNHDLLP  NECLGISGSC  ASLGNWSLTK  SVLLNHEEGT120
NDWSLTTNIP  RDRQVYYRFF  VCSIDPTTES  KHVRRWETHL  HPRSIPEMGD  KAESDDIFGD180
VEGEEKIDRG  WLTTESIVQL  KFFNSPFALK  QRMKSRLLYI  KVTPMNLRIH  TSDNVISPLE240
DSLSNDTREN  GSEQAPYGFA  EVCCYKYDDC  DIKPQPQFGV  PCAPNDVVVF  HITVGDIDSV300
AYLVDLYTYS  SKASMEEPPY  HLGYHYILPN  LLKRSEGKLE  MPITCATKHR  PLGTMRLDYL360
LIKPFTSHVL  DMKLSFSRYW  NKKWSGLDVG  HRGSGTSFKT  KEAVIRENTI  ASLKNAVAHG420
ADMVEFDVQL  SKDLVPVIYH  DFHVYVSLRS  KKTIDTHDLL  ELPMRELTLE  QLKNLKVYHL480
VEGRTREPRN  FDNDSMEEHQ  PFPTLADTLD  AIDSHVGFNI  EIKWSQQLID  GSMEMEQNVD540
RNLYLDCILD  VVFSKANSRR  IVFSCFDPDI  CAMLRFKQNL  YPVMFLTLGQ  TSRYPLYNDP600
RCNSIEKAAC  HSRGMELLGI  VAHTEDLLRD  PTQVSLTREL  GLIMFCWGDD  NNSRETIQHL660
KNLGLHAIIY  DKMEVLTSKE  TKESVFLVPS  QASQKDFFKL  QALERERRPT  EDCIYVKENS720
EKILELDEDR  RKISLSAATS  FATLMDE747

Predicted 3D structure by AlphaFold2 with pLDDT = 79.04 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MERGGHPVYL  NFKKIVSYPI  SSFALYPSFK  KSKDKVQPTK  MQRWFFMDDN  EILESDASSA60
ASSRSKKTLE  SSGEEREWTF  KVVMNHDLLP  NECLGISGSC  ASLGNWSLTK  SVLLNHEEGT120
NDWSLTTNIP  RDRQVYYRFF  VCSIDPTTES  KHVRRWETHL  HPRSIPEMGD  KAESDDIFGD180
VEGEEKIDRG  WLTTESIVQL  KFFNSPFALK  QRMKSRLLYI  KVTPMNLRIH  TSDNVISPLE240
DSLSNDTREN  GSEQAPYGFA  EVCCYKYDDC  DIKPQPQFGV  PCAPNDVVVF  HITVGDIDSV300
AYLVDLYTYS  SKASMEEPPY  HLGYHYILPN  LLKRSEGKLE  MPITCATKHR  PLGTMRLDYL360
LIKPFTSHVL  DMKLSFSRYW  NKKWSGLDVG  HRGSGTSFKT  KEAVIRENTI  ASLKNAVAHG420
ADMVEFDVQL  SKDLVPVIYH  DFHVYVSLRS  KKTIDTHDLL  ELPMRELTLE  QLKNLKVYHL480
VEGRTREPRN  FDNDSMEEHQ  PFPTLADTLD  AIDSHVGFNI  EIKWSQQLID  GSMEMEQNVD540
RNLYLDCILD  VVFSKANSRR  IVFSCFDPDI  CAMLRFKQNL  YPVMFLTLGQ  TSRYPLYNDP600
RCNSIEKAAC  HSRGMELLGI  VAHTEDLLRD  PTQVSLTREL  GLIMFCWGDD  NNSRETIQHL660
KNLGLHAIIY  DKMEVLTSKE  TKESVFLVPS  QASQKDFFKL  QALERERRPT  EDCIYVKENS720
EKILELDEDR  RKISLSAATS  FATLMDE747

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM20(79-158)

MERGGHPVYL  NFKKIVSYPI  SSFALYPSFK  KSKDKVQPTK  MQRWFFMDDN  EILESDASSA60
ASSRSKKTLE  SSGEEREWTF  KVVMNHDLLP  NECLGISGSC  ASLGNWSLTK  SVLLNHEEGT120
NDWSLTTNIP  RDRQVYYRFF  VCSIDPTTES  KHVRRWETHL  HPRSIPEMGD  KAESDDIFGD180
VEGEEKIDRG  WLTTESIVQL  KFFNSPFALK  QRMKSRLLYI  KVTPMNLRIH  TSDNVISPLE240
DSLSNDTREN  GSEQAPYGFA  EVCCYKYDDC  DIKPQPQFGV  PCAPNDVVVF  HITVGDIDSV300
AYLVDLYTYS  SKASMEEPPY  HLGYHYILPN  LLKRSEGKLE  MPITCATKHR  PLGTMRLDYL360
LIKPFTSHVL  DMKLSFSRYW  NKKWSGLDVG  HRGSGTSFKT  KEAVIRENTI  ASLKNAVAHG420
ADMVEFDVQL  SKDLVPVIYH  DFHVYVSLRS  KKTIDTHDLL  ELPMRELTLE  QLKNLKVYHL480
VEGRTREPRN  FDNDSMEEHQ  PFPTLADTLD  AIDSHVGFNI  EIKWSQQLID  GSMEMEQNVD540
RNLYLDCILD  VVFSKANSRR  IVFSCFDPDI  CAMLRFKQNL  YPVMFLTLGQ  TSRYPLYNDP600
RCNSIEKAAC  HSRGMELLGI  VAHTEDLLRD  PTQVSLTREL  GLIMFCWGDD  NNSRETIQHL660
KNLGLHAIIY  DKMEVLTSKE  TKESVFLVPS  QASQKDFFKL  QALERERRPT  EDCIYVKENS720
EKILELDEDR  RKISLSAATS  FATLMDE747

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help