Information for CAZyme ID: CAD6436601.1
Basic Information
| GenBank ID | CAD6436601.1 |
| Family | CBM35, CBM57, CBM6 |
| Sequence Length | 5193 |
| UniProt ID | CAD6436601.1(MOD) |
| Average pLDDT? | 0.00 |
| CAZy50 ID | 45 |
| CAZy50 Rep | Yes, CAD6436601.1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1335060 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. Q54 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 0.00 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM35(33-108)+CBM35(361-468)+CBM6(538-651)+CBM35(904-1000)+CBM35(1981-2091)+CBM35(2257-2366)+CBM35(3368-3480)+CBM35(3507-3628)+CBM35(3663-3748)+CBM57(4528-4635)+CBM6(4666-4800)+CBM6(4830-4975)+CBM6(5004-5140)
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.