Information for CAZyme ID: CAD31740.4
Basic Information
| GenBank ID | CAD31740.4 |
| Family | CBM14, GH18 |
| Sequence Length | 2838 |
| UniProt ID | Q8MP05(100,100) |
| Average pLDDT? | 72.30 |
| CAZy50 ID | 433 |
| CAZy50 Rep | Yes, CAD31740.4 |
| Structure Cluster | SC_CBM14_clus19, SC_GH18_clus372 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 7067 |
| Kingdom | Eukaryota |
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Coleoptera |
| Family | Tenebrionidae |
| Genus | Tenebrio |
| Species | Tenebrio molitor |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 72.30 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH18(203-552)+CBM14(592-631)+GH18(668-1017)+CBM14(1154-1203)+CBM14(1294-1340)+CBM14(1366-1416)+GH18(1494-1844)+GH18(1925-2273)+CBM14(2371-2414)+GH18(2461-2810)
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.