Information for CAZyme ID: CAB4082495.1
Basic Information
| GenBank ID | CAB4082495.1 |
| Family | GH100 |
| Sequence Length | 764 |
| UniProt ID | CAB4082495.1(MOD) |
| Average pLDDT? | 71.91 |
| CAZy50 ID | 31195 |
| CAZy50 Rep | Yes, CAB4082495.1 |
| Structure Cluster | SC_GH100_clus10 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 75948 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Asterales |
| Family | Asteraceae |
| Genus | Lactuca |
| Species | Lactuca saligna |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MGWFFRDRRS GLSWTDQTIG SISAPPMHLV ALFALVILLM SMSSYTEFKV HMEREKMGLK | 60 |
| LLFYLLPLAL LLVADVMMRY RLGYMVRAAS LPVESVKQDG CPPWGVAFVV ILVLVLVFYT | 120 |
| AQCIAALVSI PTIVSLVQGR RRSPQGDHSY KGCERLGGGC RKVKRRWFHR FPHLPSSPDQ | 180 |
| NFEVSSKINQ TMAPTTIEGT SNGSVKAKEE EQTTPSLFEI DDSDLTRLLE KPRPVNIERK | 240 |
| RSFDERSFSE MSITMSPPRN NFYKMSENSS RGFDNLDGVY SPGRWTGTPR SGYFEPHPIV | 300 |
| GDAWEALRRS LVNFRGQPVG TIAALDNSSE DLNYDQVFVR DFVPSALAFL MNGEPEIVKN | 360 |
| FLLKTVFLQS REKKVDNFKL GEGVMPASFK VLHDPVRNTE TILADYGESA IGRVAPVDSG | 420 |
| FWWIILLRAY TKSTGDSSLA EMPEIQRGIR LIMTLCLSEG FDTFPTLLCA DGCCMIDRRM | 480 |
| GVYGYPIEIQ ALFFMALRCA LLLLKRDCEG NDCIDRIVKR LHALSFHMRS YFWLDIKQLN | 540 |
| DIYRYKTEEY SHTAVNKFNV IPDSLPEWVF DFMPTRGGYF IGNVSPAKMD FRWFCLGNCV | 600 |
| AILSSLATPE QSSAIMDLIE SRWGELVGEM PLKICYPAME SHEWRIVTGC DPKNTSWSYH | 660 |
| NGGSWPVLIW LLTAACIKAG RPQIAKRAIE LAESRLLMDQ WPEYYDGKLG RFIGKQARKN | 720 |
| QTWSIAGYLV AKMMLEDPSH LGMISLEEDK QMKPQMKRSA SWVC | 764 |
Predicted 3D structure by AlphaFold2 with pLDDT = 71.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MGWFFRDRRS GLSWTDQTIG SISAPPMHLV ALFALVILLM SMSSYTEFKV HMEREKMGLK | 60 |
| LLFYLLPLAL LLVADVMMRY RLGYMVRAAS LPVESVKQDG CPPWGVAFVV ILVLVLVFYT | 120 |
| AQCIAALVSI PTIVSLVQGR RRSPQGDHSY KGCERLGGGC RKVKRRWFHR FPHLPSSPDQ | 180 |
| NFEVSSKINQ TMAPTTIEGT SNGSVKAKEE EQTTPSLFEI DDSDLTRLLE KPRPVNIERK | 240 |
| RSFDERSFSE MSITMSPPRN NFYKMSENSS RGFDNLDGVY SPGRWTGTPR SGYFEPHPIV | 300 |
| GDAWEALRRS LVNFRGQPVG TIAALDNSSE DLNYDQVFVR DFVPSALAFL MNGEPEIVKN | 360 |
| FLLKTVFLQS REKKVDNFKL GEGVMPASFK VLHDPVRNTE TILADYGESA IGRVAPVDSG | 420 |
| FWWIILLRAY TKSTGDSSLA EMPEIQRGIR LIMTLCLSEG FDTFPTLLCA DGCCMIDRRM | 480 |
| GVYGYPIEIQ ALFFMALRCA LLLLKRDCEG NDCIDRIVKR LHALSFHMRS YFWLDIKQLN | 540 |
| DIYRYKTEEY SHTAVNKFNV IPDSLPEWVF DFMPTRGGYF IGNVSPAKMD FRWFCLGNCV | 600 |
| AILSSLATPE QSSAIMDLIE SRWGELVGEM PLKICYPAME SHEWRIVTGC DPKNTSWSYH | 660 |
| NGGSWPVLIW LLTAACIKAG RPQIAKRAIE LAESRLLMDQ WPEYYDGKLG RFIGKQARKN | 720 |
| QTWSIAGYLV AKMMLEDPSH LGMISLEEDK QMKPQMKRSA SWVC | 764 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.