Information for CAZyme ID: CAB1345499.1
Basic Information
GenBank ID | CAB1345499.1 |
Family | CBM47 |
Sequence Length | 766 |
UniProt ID | A0A6F9CAD9(100,100)![]() |
Average pLDDT? | 74.77 |
CAZy50 ID | 30945 |
CAZy50 Rep | Yes, CAB1345499.1 |
Structure Cluster | SC_CBM47_clus12 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 861768 |
Kingdom | Eukaryota |
Phylum | Chordata |
Class | Actinopteri |
Order | Salmoniformes |
Family | Salmonidae |
Genus | Coregonus |
Species | Coregonus sp. 'balchen' |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MEWSRRAIPV SAQYAIDGKR NTNYGSCTYT EQDTNPWWRV DLLDVTRVTA VTITNRDDVP | 60 |
ERLDGAEIHI GNSLENNGIN NLSELIKNIQ KRRKRDLTST IKLLHQPGSG GTTMAKQVLW | 120 |
DMRKKLRCAV LTGPTSDITA IAKQVIHLFT AGSQRNQTTV LLMLEDERIL ENLQDAIIKE | 180 |
IAERNITTHK PVVIILNCVH PIYGGPSFEQ RMEPFTHLIV TFPARQGQDK HVRMAHPLIA | 240 |
QQCVKTRDYL KAVKWAKIAK DRDPKSSFVA DTLGQVYKNQ LKSRIKVEQG SIRVPKEQGS | 300 |
FKVPEEQGSI SAQDILQLSK KAFEAFKDEE RAAENEQGAD MQDDGMTKVS SIFNNRGLFG | 360 |
YLQVANIVFD SLVSLDKHWQ KVLTMEISAD SFFISIGQKK LFKYKSLISS LRDEVERICE | 420 |
FFDGYLIYSK PSIEKNEPPY FWTDVKNCYR KYVGTCTPIH SEFAIGIPLQ KLKEEMAIAF | 480 |
PGLLSCLDKG YDKTHLRRIT ILWEEIKKEW EKKKVGDNKA AQNFILANII LSKVEAASPV | 540 |
LTPLPILRRI LERHLLANFG NQTPEFYFLV LLLYWPEEHK KMDFDIDLNK HVLEMQDSYE | 600 |
NTYKKYLRSR YLRPLIFLAK GEGLSRLVHS SKIDNLLARE NPMARPKARQ DFITKKWNSG | 660 |
EVWREPVVQD LLLPVNGVVR QHRVFACVDG KEIEVCAYQQ SKVWMSGDVC FYLGFTIRGP | 720 |
VAYGIHYPSH SDRIKEEEPR KKLEVPDIKS MKDDQHFVDF HRTDLI | 766 |
Predicted 3D structure by AlphaFold2 with pLDDT = 74.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MEWSRRAIPV SAQYAIDGKR NTNYGSCTYT EQDTNPWWRV DLLDVTRVTA VTITNRDDVP | 60 |
ERLDGAEIHI GNSLENNGIN NLSELIKNIQ KRRKRDLTST IKLLHQPGSG GTTMAKQVLW | 120 |
DMRKKLRCAV LTGPTSDITA IAKQVIHLFT AGSQRNQTTV LLMLEDERIL ENLQDAIIKE | 180 |
IAERNITTHK PVVIILNCVH PIYGGPSFEQ RMEPFTHLIV TFPARQGQDK HVRMAHPLIA | 240 |
QQCVKTRDYL KAVKWAKIAK DRDPKSSFVA DTLGQVYKNQ LKSRIKVEQG SIRVPKEQGS | 300 |
FKVPEEQGSI SAQDILQLSK KAFEAFKDEE RAAENEQGAD MQDDGMTKVS SIFNNRGLFG | 360 |
YLQVANIVFD SLVSLDKHWQ KVLTMEISAD SFFISIGQKK LFKYKSLISS LRDEVERICE | 420 |
FFDGYLIYSK PSIEKNEPPY FWTDVKNCYR KYVGTCTPIH SEFAIGIPLQ KLKEEMAIAF | 480 |
PGLLSCLDKG YDKTHLRRIT ILWEEIKKEW EKKKVGDNKA AQNFILANII LSKVEAASPV | 540 |
LTPLPILRRI LERHLLANFG NQTPEFYFLV LLLYWPEEHK KMDFDIDLNK HVLEMQDSYE | 600 |
NTYKKYLRSR YLRPLIFLAK GEGLSRLVHS SKIDNLLARE NPMARPKARQ DFITKKWNSG | 660 |
EVWREPVVQD LLLPVNGVVR QHRVFACVDG KEIEVCAYQQ SKVWMSGDVC FYLGFTIRGP | 720 |
VAYGIHYPSH SDRIKEEEPR KKLEVPDIKS MKDDQHFVDF HRTDLI | 766 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.