Information for CAZyme ID: BDF44114.1
Basic Information
GenBank ID | BDF44114.1 |
Family | GH32 |
Sequence Length | 482 |
UniProt ID | A0A416HQU2(98.1,100)![]() |
Average pLDDT? | 94.25 |
CAZy50 ID | 72826 |
CAZy50 Rep | Yes, BDF44114.1 |
Structure Cluster | SC_GH32_clus114 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1898203 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Lachnospirales |
Family | Lachnospiraceae |
Genus | |
Species | Lachnospiraceae bacterium |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKGNYNIFYT PEKQYPGMPH GEMCGDFMPF YWQGTYYLFY LYKYCVYAVE TTDFVSFGQP | 60 |
FLVLRNGSPD DQDWHIGTGS VFAHDGLFLF HYTGFCEGNQ DADGKNEQVV MRATSRDLKH | 120 |
WEKDTDFYFR PDTRYYGNLH WRDPHVIWNE ELGKFCMLIT ATQKEGACLR TGCTAVYVSA | 180 |
DVRNWEHYKT LYAPRTFITH ECHDCFRMGD KWYLTFSNYS RWWETRYRVA DSFDGPWEVP | 240 |
EQDDMFDGRE FYAAKSVTDG NKRYMVGWES IREDCRDSGR HLWGGNLLVH ELVPRKDGRL | 300 |
GVRLPETIRQ SFGKVLPIET VPMQGSFRED TEGITGDVPD GFGWAALGSL EETCLFRTTI | 360 |
SWKEGTEAVG LMIHADAALE KWCQLRLEVR HGKILMDRYN RVDGDQSYQD ERPVTFHENK | 420 |
AEITLVVSGN IMLVYVDDVA LTSRCYEIGT GTVGIFAEYG SVRCTQTQLL EQETAEKPMG | 480 |
KN | 482 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.25 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKGNYNIFYT PEKQYPGMPH GEMCGDFMPF YWQGTYYLFY LYKYCVYAVE TTDFVSFGQP | 60 |
FLVLRNGSPD DQDWHIGTGS VFAHDGLFLF HYTGFCEGNQ DADGKNEQVV MRATSRDLKH | 120 |
WEKDTDFYFR PDTRYYGNLH WRDPHVIWNE ELGKFCMLIT ATQKEGACLR TGCTAVYVSA | 180 |
DVRNWEHYKT LYAPRTFITH ECHDCFRMGD KWYLTFSNYS RWWETRYRVA DSFDGPWEVP | 240 |
EQDDMFDGRE FYAAKSVTDG NKRYMVGWES IREDCRDSGR HLWGGNLLVH ELVPRKDGRL | 300 |
GVRLPETIRQ SFGKVLPIET VPMQGSFRED TEGITGDVPD GFGWAALGSL EETCLFRTTI | 360 |
SWKEGTEAVG LMIHADAALE KWCQLRLEVR HGKILMDRYN RVDGDQSYQD ERPVTFHENK | 420 |
AEITLVVSGN IMLVYVDDVA LTSRCYEIGT GTVGIFAEYG SVRCTQTQLL EQETAEKPMG | 480 |
KN | 482 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.