Information for CAZyme ID: BDA48086.1
Basic Information
GenBank ID | BDA48086.1 |
Family | GH32 |
Sequence Length | 567 |
UniProt ID | A0A8J9WRA1(100,100)![]() |
Average pLDDT? | 86.88 |
CAZy50 ID | 57047 |
CAZy50 Rep | Yes, BDA48086.1 |
Structure Cluster | SC_GH32_clus36 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2315456 |
Kingdom | Eukaryota |
Phylum | Chlorophyta |
Class | Trebouxiophyceae |
Order | |
Family | |
Genus | Coccomyxa |
Species | Coccomyxa sp. Obi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTADKIERTK LGNSWLLDPD KPWYHVMPRS GWLNDPNGPI YYKGKYHIFY QHVVGTSQWD | 60 |
WACSWGHASS ADLVHWKHEP IALQPTPGTY DAEGCWSGCS TLDSNDTPVI LYTAVRLREK | 120 |
PGLPLPPSAS DLGLQMIESQ CAAVCRPDDD DLVTWTKQSR PLIELPPPNE GLVGFRDPYI | 180 |
IQRGVDGRPW QLIIGSGVKG KGGTLLLYTS DNLLSGWKYR GSFIKGKSRP CDEWDLGEMW | 240 |
ECPFFVCLPQ TSAEEQSSKE TANGNAREAA DSTAHVLCVS PYPHYRKDRP TNPCLCWVGQ | 300 |
LSNDTFNVED ASGPHRLDLG DILYAPNAFV DGRGRTLMLA WLQELRTGGA YDYAGCLSLP | 360 |
RLLSLQGGRL HQQPAPELAQ LRLGEGVHLA NLLVEEGAAA ALPQIWGPSV DVSFRLARGS | 420 |
CSAAGILLRA WLRADADSEQ PTAAAAVVDW DAGTLEVIFS TQWDRNALSF GWDSVSKRVG | 480 |
GPIQIHEHAV QLRVMVDHSA VEIFTGSGET LTTRVYRGDM AAGDDPGMFF IAKDGAASVT | 540 |
DIAAYTMGSI WEQASDQPAK THEPAME | 567 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.88 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MTADKIERTK LGNSWLLDPD KPWYHVMPRS GWLNDPNGPI YYKGKYHIFY QHVVGTSQWD | 60 |
WACSWGHASS ADLVHWKHEP IALQPTPGTY DAEGCWSGCS TLDSNDTPVI LYTAVRLREK | 120 |
PGLPLPPSAS DLGLQMIESQ CAAVCRPDDD DLVTWTKQSR PLIELPPPNE GLVGFRDPYI | 180 |
IQRGVDGRPW QLIIGSGVKG KGGTLLLYTS DNLLSGWKYR GSFIKGKSRP CDEWDLGEMW | 240 |
ECPFFVCLPQ TSAEEQSSKE TANGNAREAA DSTAHVLCVS PYPHYRKDRP TNPCLCWVGQ | 300 |
LSNDTFNVED ASGPHRLDLG DILYAPNAFV DGRGRTLMLA WLQELRTGGA YDYAGCLSLP | 360 |
RLLSLQGGRL HQQPAPELAQ LRLGEGVHLA NLLVEEGAAA ALPQIWGPSV DVSFRLARGS | 420 |
CSAAGILLRA WLRADADSEQ PTAAAAVVDW DAGTLEVIFS TQWDRNALSF GWDSVSKRVG | 480 |
GPIQIHEHAV QLRVMVDHSA VEIFTGSGET LTTRVYRGDM AAGDDPGMFF IAKDGAASVT | 540 |
DIAAYTMGSI WEQASDQPAK THEPAME | 567 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.