Information for CAZyme ID: BCW42752.1
Basic Information
GenBank ID | BCW42752.1 |
Family | CBM22, PL39 |
Sequence Length | 1312 |
UniProt ID | BCW42752.1(MOD)![]() |
Average pLDDT? | 91.67 |
CAZy50 ID | 5961 |
CAZy50 Rep | Yes, BCW42752.1 |
Structure Cluster | SC_CBM22_clus21, SC_CBM22_clus23, SC_PL39_clus8 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2830991 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micrococcales |
Family | Micrococcaceae |
Genus | Arthrobacter |
Species | Arthrobacter sp. StoSoilB3 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPQAPGTDVS SGLEIPGGSF EEAAIPALSG GWSASGPGSA LTDSASARTG QYGARIASVS | 60 |
DTDPTILSSP EVKLKKASNV VYFRAMLRPV EGSPRVELHV RFTAANGSEI NQQVARATAL | 120 |
KTGAWAELST TAAIPSDAKN VQVFVQALGA GSVDVDDVSS DVRQRRELVP NGGAETLTAP | 180 |
APAAPTGWTA ASTQWEPLVV PNPSAEAGAS TPENWKTFNY ATTKAAMVWD TSVAHTGSKS | 240 |
LRIDGVPGSI GDWQQINYAP VTPGTYKFGF WVKGQNVAAG DIRPLVIFRN ANGQTVGGDK | 300 |
IVQNTVTNSD WTYVESVLTA PTGAVSVRID YRLYNGGTAW FDDVSIARQV TADGVAQGNT | 360 |
AGADSGTAKA GKNSLTLINQ SEGDQSVLES APFPVERLAG YDLSAAVKTA LTGAKAIAGL | 420 |
KYLDANGRTL SEQLTGPVEG ITDWGSAKVQ AFPPAAATDA KAFVRLAGKG QAWFDDISLI | 480 |
RSTVIDPAIN PNIARPSLLL GAKDVNALKD RVKNGVVGDE YQRQLSLSDK WTTQQLTDPS | 540 |
YLVNPLRGQS NIYTVPAGAT KMRLSAEFAG KGSMMVDGVS LTSLANNQPL TIPDNSFENF | 600 |
GSGTSGWAAT SGTTDAVVTK TTEWAFADAA SLQYAGASAA SKASVALTQE LPATPGGRYS | 660 |
LAATISQRGL IEGTGLVWTV SYTNDAGASV GAAYKAPAYN WDTHTRWDSP LFEATQASAN | 720 |
VFLVTGNEEA AKKAILGLKY LVGESVWGMT YALTTGGKPN GEDGYGAVHF GRAMGGFAQA | 780 |
LDLVINSKSM SETDRAWLTD RLGWMQDTQM NLAYYDRSTD AGRISNWNLD RAIGVGMVSM | 840 |
ALPNLTSSSV YRGHAQGEVR WTLDNVVGDD GAFPETIRYH AAPLVRLVPF VQALKRAGGT | 900 |
DMVNDPKLKK MHSFLINVQT PVDSTNTAAP GTVLMPAIGD ADYNEKPYRI LGWNASLYKE | 960 |
SDPELSATMQ WTWQRAGSPV ADTGANPWAL PPLLNTDPGL PAKAPNVTSS AIESVGYDIL | 1020 |
RDKGGTADEN YLIMSDTPRP LGHNHDDRTG FSLWGKSVPL ALDSGTGGYF NGDNVWFNSA | 1080 |
AAHNVVQFQT EGTWQGTAPT VTTPIRYYSD KVDVIQTGGA TPGATDYQRN VIQLKGGFNS | 1140 |
YLVWDRIKSA APSRFNLHTL TTSVDQAPGK LTAHGYQGVD LDVHLLGAAQ PTVTLDTGRV | 1200 |
SGDWPQKNQQ WIQLGQAAGT DHTVLMHPRA ADAKAIETIE HRTGSATLKA FELVAANGER | 1260 |
AMVFLNSGDS SVQTSLDVPG QWSPATAAES GSLNGTTANV AARQALVLLK TS | 1312 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.67 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MPQAPGTDVS SGLEIPGGSF EEAAIPALSG GWSASGPGSA LTDSASARTG QYGARIASVS | 60 |
DTDPTILSSP EVKLKKASNV VYFRAMLRPV EGSPRVELHV RFTAANGSEI NQQVARATAL | 120 |
KTGAWAELST TAAIPSDAKN VQVFVQALGA GSVDVDDVSS DVRQRRELVP NGGAETLTAP | 180 |
APAAPTGWTA ASTQWEPLVV PNPSAEAGAS TPENWKTFNY ATTKAAMVWD TSVAHTGSKS | 240 |
LRIDGVPGSI GDWQQINYAP VTPGTYKFGF WVKGQNVAAG DIRPLVIFRN ANGQTVGGDK | 300 |
IVQNTVTNSD WTYVESVLTA PTGAVSVRID YRLYNGGTAW FDDVSIARQV TADGVAQGNT | 360 |
AGADSGTAKA GKNSLTLINQ SEGDQSVLES APFPVERLAG YDLSAAVKTA LTGAKAIAGL | 420 |
KYLDANGRTL SEQLTGPVEG ITDWGSAKVQ AFPPAAATDA KAFVRLAGKG QAWFDDISLI | 480 |
RSTVIDPAIN PNIARPSLLL GAKDVNALKD RVKNGVVGDE YQRQLSLSDK WTTQQLTDPS | 540 |
YLVNPLRGQS NIYTVPAGAT KMRLSAEFAG KGSMMVDGVS LTSLANNQPL TIPDNSFENF | 600 |
GSGTSGWAAT SGTTDAVVTK TTEWAFADAA SLQYAGASAA SKASVALTQE LPATPGGRYS | 660 |
LAATISQRGL IEGTGLVWTV SYTNDAGASV GAAYKAPAYN WDTHTRWDSP LFEATQASAN | 720 |
VFLVTGNEEA AKKAILGLKY LVGESVWGMT YALTTGGKPN GEDGYGAVHF GRAMGGFAQA | 780 |
LDLVINSKSM SETDRAWLTD RLGWMQDTQM NLAYYDRSTD AGRISNWNLD RAIGVGMVSM | 840 |
ALPNLTSSSV YRGHAQGEVR WTLDNVVGDD GAFPETIRYH AAPLVRLVPF VQALKRAGGT | 900 |
DMVNDPKLKK MHSFLINVQT PVDSTNTAAP GTVLMPAIGD ADYNEKPYRI LGWNASLYKE | 960 |
SDPELSATMQ WTWQRAGSPV ADTGANPWAL PPLLNTDPGL PAKAPNVTSS AIESVGYDIL | 1020 |
RDKGGTADEN YLIMSDTPRP LGHNHDDRTG FSLWGKSVPL ALDSGTGGYF NGDNVWFNSA | 1080 |
AAHNVVQFQT EGTWQGTAPT VTTPIRYYSD KVDVIQTGGA TPGATDYQRN VIQLKGGFNS | 1140 |
YLVWDRIKSA APSRFNLHTL TTSVDQAPGK LTAHGYQGVD LDVHLLGAAQ PTVTLDTGRV | 1200 |
SGDWPQKNQQ WIQLGQAAGT DHTVLMHPRA ADAKAIETIE HRTGSATLKA FELVAANGER | 1260 |
AMVFLNSGDS SVQTSLDVPG QWSPATAAES GSLNGTTANV AARQALVLLK TS | 1312 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.