CAZyme3D

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Entry ID

Information for CAZyme ID: BCR91967.1

Basic Information

GenBank IDBCR91967.1
FamilyCE16
Sequence Length343
UniProt IDA0A7R7ZT09(100,100)Download
Average pLDDT?84.15
CAZy50 ID135337
CAZy50 RepYes, BCR91967.1
Structure ClusterSC_CE16_clus13
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID182096
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus chevalieri

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAYKRTLLEC  HPTLFCSVVR  IEYKISTNMK  PNLIWLAASA  IGIAAATPLP  RQNAEATRFF60
TFGNSYTDTT  FSPNNTAPSA  SNPMGNPSLG  TGTTSGGTNW  VGYLTTTQNA  SLVLSYNLAV120
GGATIDNTLV  SGNPKDLVSQ  VEMFQSTYAD  KGAVPWTGDN  AVFGVWIGIN  ECVLSSSVLV180
LMGRLVDVVS  SIGNAYSNTD  AETFTPRLIA  RYRSLVEKIY  RDGGRKFLFL  NVPAVSRTPE240
ILSQGDETAK  SHAKYLAVFN  QNVESMVKNF  TSSHEDTTTV  LYDSWSFMTR  VLDSPQEYGF300
PNATCIDDDG  HSCVWWNSYH  PTSKYHRLQA  EDMKAHLKPL  GAW343

Predicted 3D structure by AlphaFold2 with pLDDT = 84.15 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MAYKRTLLEC  HPTLFCSVVR  IEYKISTNMK  PNLIWLAASA  IGIAAATPLP  RQNAEATRFF60
TFGNSYTDTT  FSPNNTAPSA  SNPMGNPSLG  TGTTSGGTNW  VGYLTTTQNA  SLVLSYNLAV120
GGATIDNTLV  SGNPKDLVSQ  VEMFQSTYAD  KGAVPWTGDN  AVFGVWIGIN  ECVLSSSVLV180
LMGRLVDVVS  SIGNAYSNTD  AETFTPRLIA  RYRSLVEKIY  RDGGRKFLFL  NVPAVSRTPE240
ILSQGDETAK  SHAKYLAVFN  QNVESMVKNF  TSSHEDTTTV  LYDSWSFMTR  VLDSPQEYGF300
PNATCIDDDG  HSCVWWNSYH  PTSKYHRLQA  EDMKAHLKPL  GAW343

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE16(59-333)

MAYKRTLLEC  HPTLFCSVVR  IEYKISTNMK  PNLIWLAASA  IGIAAATPLP  RQNAEATRFF60
TFGNSYTDTT  FSPNNTAPSA  SNPMGNPSLG  TGTTSGGTNW  VGYLTTTQNA  SLVLSYNLAV120
GGATIDNTLV  SGNPKDLVSQ  VEMFQSTYAD  KGAVPWTGDN  AVFGVWIGIN  ECVLSSSVLV180
LMGRLVDVVS  SIGNAYSNTD  AETFTPRLIA  RYRSLVEKIY  RDGGRKFLFL  NVPAVSRTPE240
ILSQGDETAK  SHAKYLAVFN  QNVESMVKNF  TSSHEDTTTV  LYDSWSFMTR  VLDSPQEYGF300
PNATCIDDDG  HSCVWWNSYH  PTSKYHRLQA  EDMKAHLKPL  GAW343

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help