Information for CAZyme ID: BCK73386.1
Basic Information
GenBank ID | BCK73386.1 |
Family | GH88 |
Sequence Length | 415 |
UniProt ID | A0A640T5R1(95.0,100)![]() |
Average pLDDT? | 88.10 |
CAZy50 ID | 91390 |
CAZy50 Rep | Yes, BCK73386.1 |
Structure Cluster | SC_GH88_clus23 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 249582 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Kitasatosporales |
Family | Streptomycetaceae |
Genus | Streptomyces |
Species | Streptomyces libani |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MHETPHGTAH EKSHQQSREA TGQVPWADRA WAAVLERTGQ TAAEVGPRFP LYADPETGTW | 60 |
KTTSRGSWTG GFWAGLLWLR ALASGAPQDR SAAAACTRRL AHWIDQDTAT RGLIFWYGTG | 120 |
LAAGPGGDGL AAGLRERAAR SCLAAYDPER QLVPWGGAFG GPGMLARVDA VPGLVPLLAG | 180 |
LGAEGERAAY GHLTRHLTLS RSEKPPRPAW QAGPDDGWTP CAEPAPGWSR TTPWLLLGLA | 240 |
DGLHCLADGL NSREAGALWE VAGQLTAPRL APADRITAPR LAPAAPLTAP PLAPAARFTV | 300 |
LLPSPAAPLV PPAQEDQPSG PLDTSAAAIE SVALLKLAAL ARATGRGSEA DRLTARARQI | 360 |
LHRLCTGHLS ARGALTDGCY DAARALAPRH ELIWGDFFLA VGLALLTGRM APFAT | 415 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.10 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MHETPHGTAH EKSHQQSREA TGQVPWADRA WAAVLERTGQ TAAEVGPRFP LYADPETGTW | 60 |
KTTSRGSWTG GFWAGLLWLR ALASGAPQDR SAAAACTRRL AHWIDQDTAT RGLIFWYGTG | 120 |
LAAGPGGDGL AAGLRERAAR SCLAAYDPER QLVPWGGAFG GPGMLARVDA VPGLVPLLAG | 180 |
LGAEGERAAY GHLTRHLTLS RSEKPPRPAW QAGPDDGWTP CAEPAPGWSR TTPWLLLGLA | 240 |
DGLHCLADGL NSREAGALWE VAGQLTAPRL APADRITAPR LAPAAPLTAP PLAPAARFTV | 300 |
LLPSPAAPLV PPAQEDQPSG PLDTSAAAIE SVALLKLAAL ARATGRGSEA DRLTARARQI | 360 |
LHRLCTGHLS ARGALTDGCY DAARALAPRH ELIWGDFFLA VGLALLTGRM APFAT | 415 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.