Information for CAZyme ID: BCJ62042.1
Basic Information
GenBank ID | BCJ62042.1 |
Family | CBM35 |
Sequence Length | 266 |
UniProt ID | A0A2W2BVA7(100,100)![]() |
Average pLDDT? | 72.19 |
CAZy50 ID | 167377 |
CAZy50 Rep | Yes, BCJ62042.1 |
Structure Cluster | SC_CBM35_clus25 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 515350 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micromonosporales |
Family | Micromonosporaceae |
Genus | Micromonospora |
Species | Micromonospora endophytica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPNDALSDAA DPVPRSPGGV PDPDRSARAR HWVGISSLAG AIALAAIAVP PLLVPDERRP | 60 |
DGVGSAAPDG TVDPTTTATL PGGAPTTAPG AAGSGPTTGP TPPSRAPDST PQPAGSLPGP | 120 |
APNRPTRTAA PPPSATTGDA TPPASFRPVS VEAEDPGNLL SEGAGIVDCA ACAGGARVRY | 180 |
LGRLTAYLTT ATAGERTITV SYSTKGDRQL KISINGAAPT THHLTGTAWD TPRTFQYAAT | 240 |
VPAGRVSFIF YNDTGPPPDI DKISIS | 266 |
Predicted 3D structure by AlphaFold2 with pLDDT = 72.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MPNDALSDAA DPVPRSPGGV PDPDRSARAR HWVGISSLAG AIALAAIAVP PLLVPDERRP | 60 |
DGVGSAAPDG TVDPTTTATL PGGAPTTAPG AAGSGPTTGP TPPSRAPDST PQPAGSLPGP | 120 |
APNRPTRTAA PPPSATTGDA TPPASFRPVS VEAEDPGNLL SEGAGIVDCA ACAGGARVRY | 180 |
LGRLTAYLTT ATAGERTITV SYSTKGDRQL KISINGAAPT THHLTGTAWD TPRTFQYAAT | 240 |
VPAGRVSFIF YNDTGPPPDI DKISIS | 266 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.