CAZyme3D

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Entry ID

Information for CAZyme ID: BBX67702.1

Basic Information

GenBank IDBBX67702.1
FamilyGH178
Sequence Length354
UniProt IDA0A7I7M7C4(100,100)Download
Average pLDDT?94.03
CAZy50 ID87582
CAZy50 RepNo, ADP78098.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID216929
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium psychrotolerans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPEVPHVPGV  FTPEQCLQTA  ESIAATQESS  GAIPWSVGGH  TDPWDHVENA  MALTAAGLLE60
PARAAFEWSR  ATQRADGTWP  IQLRDGVVED  ANSDSNFCAY  IATGVWHHVL  VTGDRAFAAT120
MWPVVARAID  FVLGLQSSTG  EIAWGASPHG  STEEALLTGC  ASIHHSIRCA  LALADHVGDP180
QPEWEVAVGR  LGHAITDHPE  AFVAKDRWSM  EWYYPVLGGA  LRGVRAHARI  NERWDDFVVP240
GLGIRCVDDR  PWVTGAETCE  LVLALDAIGD  RTRAREQFAA  MHHLRENDGS  YWTGLVYADD300
KRWPVERTTW  TGAAVILAAD  ALSATTAASG  IFRGADLPRG  LEAEYDCECA  TSER354

Predicted 3D structure by AlphaFold2 with pLDDT = 94.03 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MPEVPHVPGV  FTPEQCLQTA  ESIAATQESS  GAIPWSVGGH  TDPWDHVENA  MALTAAGLLE60
PARAAFEWSR  ATQRADGTWP  IQLRDGVVED  ANSDSNFCAY  IATGVWHHVL  VTGDRAFAAT120
MWPVVARAID  FVLGLQSSTG  EIAWGASPHG  STEEALLTGC  ASIHHSIRCA  LALADHVGDP180
QPEWEVAVGR  LGHAITDHPE  AFVAKDRWSM  EWYYPVLGGA  LRGVRAHARI  NERWDDFVVP240
GLGIRCVDDR  PWVTGAETCE  LVLALDAIGD  RTRAREQFAA  MHHLRENDGS  YWTGLVYADD300
KRWPVERTTW  TGAAVILAAD  ALSATTAASG  IFRGADLPRG  LEAEYDCECA  TSER354

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help