Information for CAZyme ID: BBO79785.1
Basic Information
GenBank ID | BBO79785.1 |
Family | GT2, GT74 |
Sequence Length | 2652 |
UniProt ID | A0A5K7ZHP3(100,100)![]() |
Average pLDDT? | 74.89 |
CAZy50 ID | 587 |
CAZy50 Rep | Yes, BBO79785.1 |
Structure Cluster | SC_GT2_clus421, SC_GT74_clus3 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 885957 |
Kingdom | Bacteria |
Phylum | Thermodesulfobacteriota |
Class | Desulfobacteria |
Order | Desulfobacterales |
Family | Desulfosarcinaceae |
Genus | Desulfosarcina |
Species | Desulfosarcina ovata |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MINTYRRIDI MAKYIYAQQR LLNVESQWYK DLYLDHINVL NGFFEPDGSG KNTSNKFINR | 60 |
YNNLLDEIHK NGFDEEKSLI PVGKNNLILD GAHRIAACLL YNFPVTCLFT DTLAWEYNPI | 120 |
FFKFYEKHVK GGLDEDWIDA MVLQYCRLKR NIYVASVFPS AEGNDDVVVD LLSKQAQIIY | 180 |
KKDIEIRGYG QQLLIRQMYS GEQWIGGVEN KYLGARQKAY FCFSKPGPLR ILFLETDNKR | 240 |
ALSDAKEKIR KIFNVGKHSI HINDYHEETI RLSEIYLNKN SISFLNLANS RIFPNFDKLF | 300 |
KVYKKWIGNN EDKEKYCIDG SSVMAVYGIR EAVDIDFIVK GIYNHHPIHR LINCHNEESR | 360 |
YYPVKIDDII FNPKNHFYFD GVKFSSLNIV QSMKINRNEK KDRNDVELIE KLLSKKKTYY | 420 |
LNKHQQIDEL PTITKKIQKS PKKIINCVYS HTLFNGYCTK KDDIFVIWSK KPIKGSSIYY | 480 |
FQDAFSFHNI NRGIKVLGMH EPITVLPQQY SEMVWKHFDF VFTTLDDLVA GNSKFVKIFH | 540 |
PAFDAPNSMD SVKSVKMKYC IPSQTKKIAI CMIAGNKESQ IEGELYSKRL HIAKWFQQYS | 600 |
TIPFDVYGRP PFHQLDNYCG ILPTDDEKYS KLSSYRYSLC FENIYHSKWS KGYLTEKILH | 660 |
CLMCGTVPIY LGCSNIENYI PRNCFIDFRD FSDLDALDSF LGETNDDQYQ KYIVNIRKWI | 720 |
EAGNLDKFSM YHIYDKLASI AFPDTNMLQF KQLPWKETPI SKEFNNNQLE TFGTKRWFWK | 780 |
DLSKITCSLL PEMKDIVETR KDFQNKNKRN PIVNVIFSKN RALQLNGTIQ SFLLHCKDAQ | 840 |
NIDIKILYTT TSNRHEEQYS KLKKYYPEIQ FIKENNFKKD LENILSEYLY VMFNVDDNIY | 900 |
IRDFSAFQII NAFNCHEDIL GCTLRLGQNT IIKLHPVHKP LQIPKFKNFN DNLRVYNWTT | 960 |
LKPEGFGYPC ELQSAVYRVS DIGNIVKQFP FRNPNTLEAL FDKQKGKFSK LGKKNQLCFA | 1020 |
HSVCFSNPIN LVQSSWNNWS EGKDIHSIDA LAQKFDDGYR IDVERYEPMT PVSSHQVVNL | 1080 |
LLTRSPLNLN GKTGNRTTDP DNWCQGKWRI LSIPDSNGMV KVNGVQGFLT NGDMVTLSKH | 1140 |
AAEIKAAGTV VEIGSFMGLS AIVMGHALRR AGNCHAKIHC VDTWDSSYLH KIGINTDKSL | 1200 |
IEIFKSNIKH NGLNFLINLH PMASIDASST FKDNAIDLLF IDGDHCYESC YQDLSAWYPK | 1260 |
VKDGGIILGH DCRPGGEVIH ALEKFVKEKQ IPYELIKPPV ANFIFKIKKC RPLQTFNSIV | 1320 |
AQPYNDVRKN KKNLTSILIV NHNGKKNLEA CLASIRRNTF EPYEIIVVDN ASTDVSKEIL | 1380 |
RNFEDIILVE NSENIGCPQA RAQGLGYANG EVVIFLDNDT VVTPSWLSII LSYFKKEKTI | 1440 |
GLVGPLSNFA SGPQWVKNAS YRSWEELDDL ALKIHNLNKG KKTATYRLVG FCMAIRRDVI | 1500 |
DKIGSIDSKF GKFGFEDDDY TLRAIIAGFS AVIARDLFIH HTGGPQTHGD PVYNKNLLNS | 1560 |
WNYFKQKWNL PPDLKYGTPF DREKVVSQPF NAQRHFIPLQ RPSKADVYDC NSEVDMHGHI | 1620 |
SPQEKHIISH INTLHLRGKT TESINLLKAA MEVFPDSVQI ALFTANLMNE NMDYALSETI | 1680 |
LRKIPDAERN DDWFELMAYS MEGQGTFDRA DELINQALAQ NCKKLSALLN VKAVIAFKLG | 1740 |
KIEKAEYYLR NIIQSGTTDG RPYSNLGMIE VNKGNTLEGL HLIEQGFSLS PQIEVVANNY | 1800 |
HHAVTAAGAF KPALQVTSQA CRKYPISKNL NYLRINILLN LQLKRPAMCC IENAIAQFGL | 1860 |
EDGITIPAMS LRNELGPMVL NRNGLDWPSV SLCMIVKNEV DDLPGALESF KNVVSEIIIV | 1920 |
DTGSVDETKI IAEIFGATVL DYTWKDNFAD ARNESLVAAK GEWILVVDAD ERLSPTDQDR | 1980 |
FIQFLLNLSA SECGYSFVTR NYVNDVGLED WRPNHGEYPL EEMGKGWCPS TKVRLFPNSA | 2040 |
KIRFENSIHE LVEPSLREAG YSIQDCLIPI HHYGKLKKSK ALKKKKDYFR LGLKKKRENG | 2100 |
ETDYGLVELA IQAGEVGDYD KAVQLWQRVL ENAPNLPKAH FNLSYVYIQR EQYQQGLEAA | 2160 |
QRAVNLDPNL KEAQLNKMLC KIRLNDPAAV VGELAFFLEK FPNHPMAMGL AAVAYCLTSR | 2220 |
VEKGLLLFRN LEQMAFDCGA YVFEHVSKLL SAGHKSAAKK LLEAVADTPF FSQASHNLLK | 2280 |
SFEDSKIQVA SSKFLTISML TKPNLEVADR DLLSFMPEWE KMQWQDIRII KDRARADFVI | 2340 |
FPFALDRLYQ QKGHPGMLSF LRELPGFDQH EDRYVFFFKD DIGRRMDIRS VIYRVNHSLD | 2400 |
AMDLNSITLP YFVEDIYQSA INRKPRYQVN FVGTLATHLY RAYMLLPFFE KCQLKTYETL | 2460 |
LRSFSRLLNF RKEKAEYIMA LEEANTIIKQ LFPLEKTIHG VSYYFDIIAD QFQQLPDQTQ | 2520 |
QHMKAKLKRI MNASIATLCP RGVGTQSIRF FETMAMGRLP VVISDRYVFP LNNTIDYDQF | 2580 |
VIRIKETRIS QFPERLAAVF GRLSPDDSRK MGARARQVWS DYFSPSKYEK YILLTLSEVL | 2640 |
KKRRQLNQKR SI | 2652 |
Predicted 3D structure by AlphaFold2 with pLDDT = 74.89 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MINTYRRIDI MAKYIYAQQR LLNVESQWYK DLYLDHINVL NGFFEPDGSG KNTSNKFINR | 60 |
YNNLLDEIHK NGFDEEKSLI PVGKNNLILD GAHRIAACLL YNFPVTCLFT DTLAWEYNPI | 120 |
FFKFYEKHVK GGLDEDWIDA MVLQYCRLKR NIYVASVFPS AEGNDDVVVD LLSKQAQIIY | 180 |
KKDIEIRGYG QQLLIRQMYS GEQWIGGVEN KYLGARQKAY FCFSKPGPLR ILFLETDNKR | 240 |
ALSDAKEKIR KIFNVGKHSI HINDYHEETI RLSEIYLNKN SISFLNLANS RIFPNFDKLF | 300 |
KVYKKWIGNN EDKEKYCIDG SSVMAVYGIR EAVDIDFIVK GIYNHHPIHR LINCHNEESR | 360 |
YYPVKIDDII FNPKNHFYFD GVKFSSLNIV QSMKINRNEK KDRNDVELIE KLLSKKKTYY | 420 |
LNKHQQIDEL PTITKKIQKS PKKIINCVYS HTLFNGYCTK KDDIFVIWSK KPIKGSSIYY | 480 |
FQDAFSFHNI NRGIKVLGMH EPITVLPQQY SEMVWKHFDF VFTTLDDLVA GNSKFVKIFH | 540 |
PAFDAPNSMD SVKSVKMKYC IPSQTKKIAI CMIAGNKESQ IEGELYSKRL HIAKWFQQYS | 600 |
TIPFDVYGRP PFHQLDNYCG ILPTDDEKYS KLSSYRYSLC FENIYHSKWS KGYLTEKILH | 660 |
CLMCGTVPIY LGCSNIENYI PRNCFIDFRD FSDLDALDSF LGETNDDQYQ KYIVNIRKWI | 720 |
EAGNLDKFSM YHIYDKLASI AFPDTNMLQF KQLPWKETPI SKEFNNNQLE TFGTKRWFWK | 780 |
DLSKITCSLL PEMKDIVETR KDFQNKNKRN PIVNVIFSKN RALQLNGTIQ SFLLHCKDAQ | 840 |
NIDIKILYTT TSNRHEEQYS KLKKYYPEIQ FIKENNFKKD LENILSEYLY VMFNVDDNIY | 900 |
IRDFSAFQII NAFNCHEDIL GCTLRLGQNT IIKLHPVHKP LQIPKFKNFN DNLRVYNWTT | 960 |
LKPEGFGYPC ELQSAVYRVS DIGNIVKQFP FRNPNTLEAL FDKQKGKFSK LGKKNQLCFA | 1020 |
HSVCFSNPIN LVQSSWNNWS EGKDIHSIDA LAQKFDDGYR IDVERYEPMT PVSSHQVVNL | 1080 |
LLTRSPLNLN GKTGNRTTDP DNWCQGKWRI LSIPDSNGMV KVNGVQGFLT NGDMVTLSKH | 1140 |
AAEIKAAGTV VEIGSFMGLS AIVMGHALRR AGNCHAKIHC VDTWDSSYLH KIGINTDKSL | 1200 |
IEIFKSNIKH NGLNFLINLH PMASIDASST FKDNAIDLLF IDGDHCYESC YQDLSAWYPK | 1260 |
VKDGGIILGH DCRPGGEVIH ALEKFVKEKQ IPYELIKPPV ANFIFKIKKC RPLQTFNSIV | 1320 |
AQPYNDVRKN KKNLTSILIV NHNGKKNLEA CLASIRRNTF EPYEIIVVDN ASTDVSKEIL | 1380 |
RNFEDIILVE NSENIGCPQA RAQGLGYANG EVVIFLDNDT VVTPSWLSII LSYFKKEKTI | 1440 |
GLVGPLSNFA SGPQWVKNAS YRSWEELDDL ALKIHNLNKG KKTATYRLVG FCMAIRRDVI | 1500 |
DKIGSIDSKF GKFGFEDDDY TLRAIIAGFS AVIARDLFIH HTGGPQTHGD PVYNKNLLNS | 1560 |
WNYFKQKWNL PPDLKYGTPF DREKVVSQPF NAQRHFIPLQ RPSKADVYDC NSEVDMHGHI | 1620 |
SPQEKHIISH INTLHLRGKT TESINLLKAA MEVFPDSVQI ALFTANLMNE NMDYALSETI | 1680 |
LRKIPDAERN DDWFELMAYS MEGQGTFDRA DELINQALAQ NCKKLSALLN VKAVIAFKLG | 1740 |
KIEKAEYYLR NIIQSGTTDG RPYSNLGMIE VNKGNTLEGL HLIEQGFSLS PQIEVVANNY | 1800 |
HHAVTAAGAF KPALQVTSQA CRKYPISKNL NYLRINILLN LQLKRPAMCC IENAIAQFGL | 1860 |
EDGITIPAMS LRNELGPMVL NRNGLDWPSV SLCMIVKNEV DDLPGALESF KNVVSEIIIV | 1920 |
DTGSVDETKI IAEIFGATVL DYTWKDNFAD ARNESLVAAK GEWILVVDAD ERLSPTDQDR | 1980 |
FIQFLLNLSA SECGYSFVTR NYVNDVGLED WRPNHGEYPL EEMGKGWCPS TKVRLFPNSA | 2040 |
KIRFENSIHE LVEPSLREAG YSIQDCLIPI HHYGKLKKSK ALKKKKDYFR LGLKKKRENG | 2100 |
ETDYGLVELA IQAGEVGDYD KAVQLWQRVL ENAPNLPKAH FNLSYVYIQR EQYQQGLEAA | 2160 |
QRAVNLDPNL KEAQLNKMLC KIRLNDPAAV VGELAFFLEK FPNHPMAMGL AAVAYCLTSR | 2220 |
VEKGLLLFRN LEQMAFDCGA YVFEHVSKLL SAGHKSAAKK LLEAVADTPF FSQASHNLLK | 2280 |
SFEDSKIQVA SSKFLTISML TKPNLEVADR DLLSFMPEWE KMQWQDIRII KDRARADFVI | 2340 |
FPFALDRLYQ QKGHPGMLSF LRELPGFDQH EDRYVFFFKD DIGRRMDIRS VIYRVNHSLD | 2400 |
AMDLNSITLP YFVEDIYQSA INRKPRYQVN FVGTLATHLY RAYMLLPFFE KCQLKTYETL | 2460 |
LRSFSRLLNF RKEKAEYIMA LEEANTIIKQ LFPLEKTIHG VSYYFDIIAD QFQQLPDQTQ | 2520 |
QHMKAKLKRI MNASIATLCP RGVGTQSIRF FETMAMGRLP VVISDRYVFP LNNTIDYDQF | 2580 |
VIRIKETRIS QFPERLAAVF GRLSPDDSRK MGARARQVWS DYFSPSKYEK YILLTLSEVL | 2640 |
KKRRQLNQKR SI | 2652 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.