Information for CAZyme ID: BBJ26608.1
Basic Information
| GenBank ID | BBJ26608.1 |
| Family | CBM2, GH9 |
| Sequence Length | 619 |
| UniProt ID | A0A455XIQ4(100,100) |
| Average pLDDT? | 85.90 |
| CAZy50 ID | 49719 |
| CAZy50 Rep | Yes, BBJ26608.1 |
| Structure Cluster | SC_CBM2_clus2, SC_GH9_clus55 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2028187 |
| Kingdom | Eukaryota |
| Phylum | Mollusca |
| Class | Bivalvia |
| Order | Myida |
| Family | Xylophagaidae |
| Genus | Xylophaga |
| Species | Xylophaga rikuzenica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 85.90 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.