Basic information |
Taxonomy |
Protein Sequence |
Structure visualization |
Binding Residues |
dbCAN domains |
Homology within Cluster
Information for CAZyme ID: BBH04735.1
Basic Information
| GenBank ID | BBH04735.1 |
| Family | GT0, GT1 |
| Sequence Length | 1762 |
| UniProt ID | A0A4Y1RKW0(100,100) |
| Average pLDDT? | 78.01 |
| CAZy50 ID | 2336 |
| CAZy50 Rep | Yes, BBH04735.1 |
| Structure Cluster | SC_GT1_clus111 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3755 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Rosales |
| Family | Rosaceae |
| Genus | Prunus |
| Species | Prunus dulcis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MHSCKLFESV KEERERGREM ENKTRSCKRL VLVPCPYQGH INPMLQLGTF LHSKGFSITI | 60 |
| VHTHFNSPNP SNHPEFTFLP IPDGLTEHEI LSGNLVAILL ALNANCKASF QQCLTQLMEQ | 120 |
| EPQNSISIIY DDIMYFSEAV ANYLNIPSIV LRTVSITNFI ARSTVLQLLS KGSFPFPESM | 180 |
| SRDPVPDLDP LRFKDLPISN FDTYENYSKL VVNLHKVRTS SAVIWNTVDC LEQSSLAQIQ | 240 |
| QQCQVPIFTI GPLHKIATAA STSLLEEDMG CIAWLDKQSH NSVIYVSLGS VASISEKELA | 300 |
| EMAWGLAKSK QPFLWVIRPG SICGSDWIEL LPQGFIEAIG ERGCIVKWAP QRQVLAHDAV | 360 |
| GGFWSHCGWN STLESLSEGV PMICWPCFSD QKVHARYVSQ VCKIGIQLEN ELERGEIERA | 420 |
| VRKLMVDDDG KEIRARAKEL KEKIEVSMKG GSSYHCLNEL EKLISPKRIN KDIMYDSRLW | 480 |
| PGQPENIGPY LSHLQNERFE RQLRELLLQA IKCLCVRAHP VIGEKEEEEG GREMENKAQS | 540 |
| GHRLVLVPCP YQGHINPMLQ LGTFLHSKGF SISIVHTHFN SPNPSNHPEF TFFPIPDGLT | 600 |
| ADEISSGNAV AIMFTINANC KASFKQCLTD RVTEQEPQNK ITCIIYDEFM YFSESVANDL | 660 |
| NIPRILLRTQ SATNFIARNT LIRLHSKGCT PFPDSMSLNL VPELHPLRFK DLPISIFDTL | 720 |
| ENVLKLMANG HDVRTSSAII WNTLDCLEQS SLAQVQQQCQ VPIFSIGPLH KIATAASSSS | 780 |
| LLEEDTSCIA WLDKQSHNSV IYVSLGSLAF ISEKELFEMA WGLINSRQPF LWVIRPGSVC | 840 |
| DSDGIELLPQ GFSEAVGERG CIVTWAPQME VLAHGAVGGF WSHCGWNSTL ESMSEGVPML | 900 |
| CRPCSSDQKV NARCVSQVWK IGLQLENELE RGEVERAVKK LMVDDDGKGM RVRAKDLKEK | 960 |
| IEVSMKGGSS YHCLNKLVEL IRLVLVPFHS KATYTLCLSW QPSFTHFHCS HPFQLSKPFK | 1020 |
| HPTFTFFPIP DGLTSDEISS GNTLAILSAL NANCKAMIEQ EPQNKIICII YDGIMYFSES | 1080 |
| VANYVNIPSI LLRTQIAINF IALNPLLRLH SKGHTPFRGP FHKIATAASS SSLEEDTGCI | 1140 |
| VWLEKQSHNS VIYKELDEMA WGLANSKQLF LWVIRSGSIC GSDWIELLPQ EFIEAVGERG | 1200 |
| CIVKWAPQME VLAHDEVDGF WSHCCWNSTL ESLSEGVPMI CRPCSGDQKV QAREGRDREL | 1260 |
| EKIEVSMKGG STYHSLNELV ELIREMEKKS QSGQLLVLVP CPYQGHINPM LKLGTFLHSK | 1320 |
| GFSISIVHTH FNSPNPSNHP EFTFFPIPDG LTADEISSGN VVAIVFAINA NCKASFKQCL | 1380 |
| TDRVTEHERQ NKITCIIYDE FMYFSESVAN DLNIPRILLR TQSATNFIAR NAVIRLHSKG | 1440 |
| CTPFPGMCPV SSFLCYFPQT KKEANARVIF LQKSMLVNSV DELHPLRFKD LPITIFDTLE | 1500 |
| NYSKLLAIAN NDRTSSAIIW NTLDCLEQSS LAKVQQQCQV PIFSIGPLHK IATVASSSLL | 1560 |
| EEDTGCVAWL DKQSHNSVIY VSLWSLASIS EKELAEMAWG LINSRQPFLW VIRPGSICGS | 1620 |
| DWIELLPQGF LEAVGERSCI VKWAPQMEVL THGAVGGFWS HCGWNSTLES ISEGVPMLCR | 1680 |
| PCFSDQKVNA RYVSEVWKIG IQLENELERG EIERAVRKLL VDDDGKGMRV RAKELKEKIE | 1740 |
| VSMKGGSTYH FLNELVELIK SF | 1762 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.01 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MHSCKLFESV KEERERGREM ENKTRSCKRL VLVPCPYQGH INPMLQLGTF LHSKGFSITI | 60 |
| VHTHFNSPNP SNHPEFTFLP IPDGLTEHEI LSGNLVAILL ALNANCKASF QQCLTQLMEQ | 120 |
| EPQNSISIIY DDIMYFSEAV ANYLNIPSIV LRTVSITNFI ARSTVLQLLS KGSFPFPESM | 180 |
| SRDPVPDLDP LRFKDLPISN FDTYENYSKL VVNLHKVRTS SAVIWNTVDC LEQSSLAQIQ | 240 |
| QQCQVPIFTI GPLHKIATAA STSLLEEDMG CIAWLDKQSH NSVIYVSLGS VASISEKELA | 300 |
| EMAWGLAKSK QPFLWVIRPG SICGSDWIEL LPQGFIEAIG ERGCIVKWAP QRQVLAHDAV | 360 |
| GGFWSHCGWN STLESLSEGV PMICWPCFSD QKVHARYVSQ VCKIGIQLEN ELERGEIERA | 420 |
| VRKLMVDDDG KEIRARAKEL KEKIEVSMKG GSSYHCLNEL EKLISPKRIN KDIMYDSRLW | 480 |
| PGQPENIGPY LSHLQNERFE RQLRELLLQA IKCLCVRAHP VIGEKEEEEG GREMENKAQS | 540 |
| GHRLVLVPCP YQGHINPMLQ LGTFLHSKGF SISIVHTHFN SPNPSNHPEF TFFPIPDGLT | 600 |
| ADEISSGNAV AIMFTINANC KASFKQCLTD RVTEQEPQNK ITCIIYDEFM YFSESVANDL | 660 |
| NIPRILLRTQ SATNFIARNT LIRLHSKGCT PFPDSMSLNL VPELHPLRFK DLPISIFDTL | 720 |
| ENVLKLMANG HDVRTSSAII WNTLDCLEQS SLAQVQQQCQ VPIFSIGPLH KIATAASSSS | 780 |
| LLEEDTSCIA WLDKQSHNSV IYVSLGSLAF ISEKELFEMA WGLINSRQPF LWVIRPGSVC | 840 |
| DSDGIELLPQ GFSEAVGERG CIVTWAPQME VLAHGAVGGF WSHCGWNSTL ESMSEGVPML | 900 |
| CRPCSSDQKV NARCVSQVWK IGLQLENELE RGEVERAVKK LMVDDDGKGM RVRAKDLKEK | 960 |
| IEVSMKGGSS YHCLNKLVEL IRLVLVPFHS KATYTLCLSW QPSFTHFHCS HPFQLSKPFK | 1020 |
| HPTFTFFPIP DGLTSDEISS GNTLAILSAL NANCKAMIEQ EPQNKIICII YDGIMYFSES | 1080 |
| VANYVNIPSI LLRTQIAINF IALNPLLRLH SKGHTPFRGP FHKIATAASS SSLEEDTGCI | 1140 |
| VWLEKQSHNS VIYKELDEMA WGLANSKQLF LWVIRSGSIC GSDWIELLPQ EFIEAVGERG | 1200 |
| CIVKWAPQME VLAHDEVDGF WSHCCWNSTL ESLSEGVPMI CRPCSGDQKV QAREGRDREL | 1260 |
| EKIEVSMKGG STYHSLNELV ELIREMEKKS QSGQLLVLVP CPYQGHINPM LKLGTFLHSK | 1320 |
| GFSISIVHTH FNSPNPSNHP EFTFFPIPDG LTADEISSGN VVAIVFAINA NCKASFKQCL | 1380 |
| TDRVTEHERQ NKITCIIYDE FMYFSESVAN DLNIPRILLR TQSATNFIAR NAVIRLHSKG | 1440 |
| CTPFPGMCPV SSFLCYFPQT KKEANARVIF LQKSMLVNSV DELHPLRFKD LPITIFDTLE | 1500 |
| NYSKLLAIAN NDRTSSAIIW NTLDCLEQSS LAKVQQQCQV PIFSIGPLHK IATVASSSLL | 1560 |
| EEDTGCVAWL DKQSHNSVIY VSLWSLASIS EKELAEMAWG LINSRQPFLW VIRPGSICGS | 1620 |
| DWIELLPQGF LEAVGERSCI VKWAPQMEVL THGAVGGFWS HCGWNSTLES ISEGVPMLCR | 1680 |
| PCFSDQKVNA RYVSEVWKIG IQLENELERG EIERAVRKLL VDDDGKGMRV RAKELKEKIE | 1740 |
| VSMKGGSTYH FLNELVELIK SF | 1762 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.