Information for CAZyme ID: BBF45207.1
Basic Information
GenBank ID | BBF45207.1 |
Family | GH2 |
Sequence Length | 1025 |
UniProt ID | A0A7U6KJY4(100,100)![]() |
Average pLDDT? | 95.10 |
CAZy50 ID | 13249 |
CAZy50 Rep | Yes, BBF45207.1 |
Structure Cluster | SC_GH2_clus84 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2093742 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Lachnospirales |
Family | Lachnospiraceae |
Genus | |
Species | Lachnospiraceae bacterium KM106-2 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRRVEVPDRK WLSDPEVFAV NREEAHSDHW FYEKMEDIAY GDAMPLKQSL NGTWRFAFAK | 60 |
NPEVRLKEFY QEDFDDTSLD FIQVPGHIEL QGYDKIQYIN TLYPWDGLDE LRPPEISKTD | 120 |
NPVSSYVKTF ELKEELQGKE TFLSLQGVES ACYIWVNGSF VGYAEDGFTP SEFNITSFLK | 180 |
KGTNRLAIEV YKRSSGSWIE DQDFWRFSGI FREVYLYAVP STHVEDLFIK TALSDSYTTG | 240 |
NLKADIRLSG EMDCMVKAYI LGKDGVRREL GQKAAAEQIT LEAKFENVDL WSAEQPNLYQ | 300 |
LFIELYKGDQ LVEVVPYSFG FREFKMIDKV MCLNGKRIVF KGVNRHEFNA RRGRNITKED | 360 |
MLWDIRFMKQ HNINAVRTSH YPNQSEWYRL CDEYGIYLID ETNMESHGSW QKLGKLDPEW | 420 |
NVPGDKKEWL GAILDRAKSM VERDKNHASV LIWSCGNESY AGKDILEMSH YFHEKDPDRL | 480 |
VHYEGVFWNR EYEETSDMES RMYAKPNEII EYLKDSPKKP YISCEYMHAM GNSLGGMKKY | 540 |
IELEKYPMYQ GGFIWDYIDQ AIYKTLEDGR EVLAYGGDFM DRPTDYNFVT NGIVYADRTP | 600 |
SPKAQEVKYL YQDLKLYPDE TGFVIKNEQL FASTDAYEMI YQVKRDGETI YEQKASCHVL | 660 |
AGEERKIVLE VPTWEAPGVY TYQVSACLKE NRIFAKAGYE IAFGQKVNVI SKETKMVKKE | 720 |
MRVVHGDGHL GIHGDGFNIL FSAPEGGIVS LKYDGKEYIT RAPKPYYYRA STDNDRGYGY | 780 |
PFECGCYMQA GMFQKCTDMK VDEKDDQVVI TYTYLLPLPK KVETYVEYTV TGDGTIQVHL | 840 |
TYPGAADLPM LPLFGYSMKL YSDMQQVRYF GKGPDENYID RCEGARVDWF ETTPEKNVSG | 900 |
YIVPQECGNR TSVYEIQIKD QHGQGLKIQA VDKPIEFSVL PYSVYELENA MHHYELPNPA | 960 |
YTYLNLIGSQ MGVGGDDSWG ARVHKEYEID SSERLEYTFC ISAFSLSTKS PSLDERHLSS | 1020 |
SYFNQ | 1025 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.10 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRRVEVPDRK WLSDPEVFAV NREEAHSDHW FYEKMEDIAY GDAMPLKQSL NGTWRFAFAK | 60 |
NPEVRLKEFY QEDFDDTSLD FIQVPGHIEL QGYDKIQYIN TLYPWDGLDE LRPPEISKTD | 120 |
NPVSSYVKTF ELKEELQGKE TFLSLQGVES ACYIWVNGSF VGYAEDGFTP SEFNITSFLK | 180 |
KGTNRLAIEV YKRSSGSWIE DQDFWRFSGI FREVYLYAVP STHVEDLFIK TALSDSYTTG | 240 |
NLKADIRLSG EMDCMVKAYI LGKDGVRREL GQKAAAEQIT LEAKFENVDL WSAEQPNLYQ | 300 |
LFIELYKGDQ LVEVVPYSFG FREFKMIDKV MCLNGKRIVF KGVNRHEFNA RRGRNITKED | 360 |
MLWDIRFMKQ HNINAVRTSH YPNQSEWYRL CDEYGIYLID ETNMESHGSW QKLGKLDPEW | 420 |
NVPGDKKEWL GAILDRAKSM VERDKNHASV LIWSCGNESY AGKDILEMSH YFHEKDPDRL | 480 |
VHYEGVFWNR EYEETSDMES RMYAKPNEII EYLKDSPKKP YISCEYMHAM GNSLGGMKKY | 540 |
IELEKYPMYQ GGFIWDYIDQ AIYKTLEDGR EVLAYGGDFM DRPTDYNFVT NGIVYADRTP | 600 |
SPKAQEVKYL YQDLKLYPDE TGFVIKNEQL FASTDAYEMI YQVKRDGETI YEQKASCHVL | 660 |
AGEERKIVLE VPTWEAPGVY TYQVSACLKE NRIFAKAGYE IAFGQKVNVI SKETKMVKKE | 720 |
MRVVHGDGHL GIHGDGFNIL FSAPEGGIVS LKYDGKEYIT RAPKPYYYRA STDNDRGYGY | 780 |
PFECGCYMQA GMFQKCTDMK VDEKDDQVVI TYTYLLPLPK KVETYVEYTV TGDGTIQVHL | 840 |
TYPGAADLPM LPLFGYSMKL YSDMQQVRYF GKGPDENYID RCEGARVDWF ETTPEKNVSG | 900 |
YIVPQECGNR TSVYEIQIKD QHGQGLKIQA VDKPIEFSVL PYSVYELENA MHHYELPNPA | 960 |
YTYLNLIGSQ MGVGGDDSWG ARVHKEYEID SSERLEYTFC ISAFSLSTKS PSLDERHLSS | 1020 |
SYFNQ | 1025 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.