Information for CAZyme ID: BBD45930.1
Basic Information
| GenBank ID | BBD45930.1 |
| Family | GH151 |
| Sequence Length | 696 |
| UniProt ID | A0A3G9EPK1(100,100) |
| Average pLDDT? | 94.58 |
| CAZy50 ID | 39189 |
| CAZy50 Rep | Yes, BBD45930.1 |
| Structure Cluster | SC_GH151_clus1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1978337 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Dysgonomonadaceae |
| Genus | Petrimonas |
| Species | Petrimonas sp. IBARAKI |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPEKDNLWYK TSTWRNLIDM HIPDWNPEFL SEFSPEEYAQ SMVDAKVDAS IIYAGNCLGM | 60 |
| CFWPTKVGHM HKGLKGRDIN SETINALHKQ GIKVIVYFNI WNRWAYDTYP SWRMIKADGR | 120 |
| STTENADGSF SRFGQCCMNN EGYRSFVSEQ ITDLSKSFDC DGLWIDMIGY FGTVCYCGSC | 180 |
| RDKYLAETGR EIPKVINWDD PKWVDFVRSR ERWFDEFAQM IQDAAHNINP NLTLAFQTTS | 240 |
| LLSGWGGGVT QSFLNRSDYL AGDFYGQPMQ YSVICKYLNN LTRNRPIEFM TSRCYNLEFH | 300 |
| TTTKTDEELR SSVLGAYAHN AAFTFIDAID PIGTIDRDFY RRMGRIKDQV SIYQRAINPD | 360 |
| AEMISDVGFY LNFASAYNPA QNGVPMRSAS SYFSIVRDMQ NIGGMMVRNN ILYDFIGEPQ | 420 |
| LDNLNRYSVI VLPNQYVLSD DEIRAFRRYV SEGGNLVVTG ESGMNNMEGN RLVDFALSDV | 480 |
| LGVHYKGKTE ENRTYIAPTV EGQVHFKEND AKYPLALTGP QIIVKTDPGI KTLATITLPY | 540 |
| SSSGEIYKFG SAISNPPAYP SEHPSVTLNS YGKGQAMYIA APLEKEILRP QQQTFASLIG | 600 |
| RLYSPRLSTN APRWLESIVF RDSDNKRYQL TLNNISDNER GLIAYNINVT LEIPEQIVSI | 660 |
| TDVATGQAIK YEQEKGKVDI SIEELKDFSM LLINFK | 696 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.58 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MPEKDNLWYK TSTWRNLIDM HIPDWNPEFL SEFSPEEYAQ SMVDAKVDAS IIYAGNCLGM | 60 |
| CFWPTKVGHM HKGLKGRDIN SETINALHKQ GIKVIVYFNI WNRWAYDTYP SWRMIKADGR | 120 |
| STTENADGSF SRFGQCCMNN EGYRSFVSEQ ITDLSKSFDC DGLWIDMIGY FGTVCYCGSC | 180 |
| RDKYLAETGR EIPKVINWDD PKWVDFVRSR ERWFDEFAQM IQDAAHNINP NLTLAFQTTS | 240 |
| LLSGWGGGVT QSFLNRSDYL AGDFYGQPMQ YSVICKYLNN LTRNRPIEFM TSRCYNLEFH | 300 |
| TTTKTDEELR SSVLGAYAHN AAFTFIDAID PIGTIDRDFY RRMGRIKDQV SIYQRAINPD | 360 |
| AEMISDVGFY LNFASAYNPA QNGVPMRSAS SYFSIVRDMQ NIGGMMVRNN ILYDFIGEPQ | 420 |
| LDNLNRYSVI VLPNQYVLSD DEIRAFRRYV SEGGNLVVTG ESGMNNMEGN RLVDFALSDV | 480 |
| LGVHYKGKTE ENRTYIAPTV EGQVHFKEND AKYPLALTGP QIIVKTDPGI KTLATITLPY | 540 |
| SSSGEIYKFG SAISNPPAYP SEHPSVTLNS YGKGQAMYIA APLEKEILRP QQQTFASLIG | 600 |
| RLYSPRLSTN APRWLESIVF RDSDNKRYQL TLNNISDNER GLIAYNINVT LEIPEQIVSI | 660 |
| TDVATGQAIK YEQEKGKVDI SIEELKDFSM LLINFK | 696 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.