CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BAL91520.1

Basic Information

GenBank IDBAL91520.1
FamilyCBM13
Sequence Length756
UniProt IDI0HET3(100,100)Download
Average pLDDT?75.24
CAZy50 ID32084
CAZy50 RepYes, BAL91520.1
Structure ClusterSC_CBM13_clus171
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID512565
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusActinoplanes
SpeciesActinoplanes missouriensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSAHRRPAFR  GSPPGRRRAA  GDNSRRGTRS  AAFRLLPVAL  GLALLGVGGV  VGPSVIGVTP60
ADDRDRFALS  ALPADAPEEG  LVYSGLKLAS  AGSLCSGNYL  LYEQTCTHGP  DAAPAGLAVR120
RDVAPVTESP  ARQVSAVRRE  TGAVPLDAEI  ARDEGGSALT  ADAPALIPDA  APGQADFILG180
PEDVACSGDG  RSGKRVQLLY  LYESATASRY  AKFLTSFRTW  AAGVDAIYDA  SAGETGGSRH240
IRYVTTPECR  VDVAEVQLPD  DSLRSFTSTI  ESLRDLGYNR  TDRKYLMFSD  TNVYCGISSY300
VADTRPTRGN  RNNGGPSYAR  VDAGCWGSVM  AAHELTHTLG  AVLIDSPNST  GAGSCTDDHD360
LLCGADRSGK  PMRAVCPKTN  EIRLDCGHDD  YFSTNPQRGS  YLDTHWNVAL  SDFLLRSDGG420
DDIPDAPRAV  TPQPAEQQPE  PPAPSVPVSP  SPSAASAEPS  VAPSVQVPSS  APPSPSPSVS480
PSAEPEPSVE  QNTAPALPEL  EAVAHTVAPS  APAGPDGDAE  RGAPAESPGT  TNDGVQAVLE540
IREPTSTSVR  LTWSSAADDA  NYQVSVGGKP  VATTKATRAR  LIGLKPDAKY  VVEVRNRKLG600
YVAKGTAITA  PAARPVQNSW  FVLTNSLTGG  AADLYAARDT  DGTPLTLGDQ  DGGAQQQWQL660
VPAEDGTYSL  VSRASNRCAV  ALGGRPVAGA  PLVQGDCYAA  DGARWTLQAS  DYGFTVRSTS720
DDLVIGVGAQ  RFGAHRVLVL  QQDTGQRHQS  WTAVPD756

Predicted 3D structure by AlphaFold2 with pLDDT = 75.24 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MSAHRRPAFR  GSPPGRRRAA  GDNSRRGTRS  AAFRLLPVAL  GLALLGVGGV  VGPSVIGVTP60
ADDRDRFALS  ALPADAPEEG  LVYSGLKLAS  AGSLCSGNYL  LYEQTCTHGP  DAAPAGLAVR120
RDVAPVTESP  ARQVSAVRRE  TGAVPLDAEI  ARDEGGSALT  ADAPALIPDA  APGQADFILG180
PEDVACSGDG  RSGKRVQLLY  LYESATASRY  AKFLTSFRTW  AAGVDAIYDA  SAGETGGSRH240
IRYVTTPECR  VDVAEVQLPD  DSLRSFTSTI  ESLRDLGYNR  TDRKYLMFSD  TNVYCGISSY300
VADTRPTRGN  RNNGGPSYAR  VDAGCWGSVM  AAHELTHTLG  AVLIDSPNST  GAGSCTDDHD360
LLCGADRSGK  PMRAVCPKTN  EIRLDCGHDD  YFSTNPQRGS  YLDTHWNVAL  SDFLLRSDGG420
DDIPDAPRAV  TPQPAEQQPE  PPAPSVPVSP  SPSAASAEPS  VAPSVQVPSS  APPSPSPSVS480
PSAEPEPSVE  QNTAPALPEL  EAVAHTVAPS  APAGPDGDAE  RGAPAESPGT  TNDGVQAVLE540
IREPTSTSVR  LTWSSAADDA  NYQVSVGGKP  VATTKATRAR  LIGLKPDAKY  VVEVRNRKLG600
YVAKGTAITA  PAARPVQNSW  FVLTNSLTGG  AADLYAARDT  DGTPLTLGDQ  DGGAQQQWQL660
VPAEDGTYSL  VSRASNRCAV  ALGGRPVAGA  PLVQGDCYAA  DGARWTLQAS  DYGFTVRSTS720
DDLVIGVGAQ  RFGAHRVLVL  QQDTGQRHQS  WTAVPD756

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM13(622-752)

MSAHRRPAFR  GSPPGRRRAA  GDNSRRGTRS  AAFRLLPVAL  GLALLGVGGV  VGPSVIGVTP60
ADDRDRFALS  ALPADAPEEG  LVYSGLKLAS  AGSLCSGNYL  LYEQTCTHGP  DAAPAGLAVR120
RDVAPVTESP  ARQVSAVRRE  TGAVPLDAEI  ARDEGGSALT  ADAPALIPDA  APGQADFILG180
PEDVACSGDG  RSGKRVQLLY  LYESATASRY  AKFLTSFRTW  AAGVDAIYDA  SAGETGGSRH240
IRYVTTPECR  VDVAEVQLPD  DSLRSFTSTI  ESLRDLGYNR  TDRKYLMFSD  TNVYCGISSY300
VADTRPTRGN  RNNGGPSYAR  VDAGCWGSVM  AAHELTHTLG  AVLIDSPNST  GAGSCTDDHD360
LLCGADRSGK  PMRAVCPKTN  EIRLDCGHDD  YFSTNPQRGS  YLDTHWNVAL  SDFLLRSDGG420
DDIPDAPRAV  TPQPAEQQPE  PPAPSVPVSP  SPSAASAEPS  VAPSVQVPSS  APPSPSPSVS480
PSAEPEPSVE  QNTAPALPEL  EAVAHTVAPS  APAGPDGDAE  RGAPAESPGT  TNDGVQAVLE540
IREPTSTSVR  LTWSSAADDA  NYQVSVGGKP  VATTKATRAR  LIGLKPDAKY  VVEVRNRKLG600
YVAKGTAITA  PAARPVQNSW  FVLTNSLTGG  AADLYAARDT  DGTPLTLGDQ  DGGAQQQWQL660
VPAEDGTYSL  VSRASNRCAV  ALGGRPVAGA  PLVQGDCYAA  DGARWTLQAS  DYGFTVRSTS720
DDLVIGVGAQ  RFGAHRVLVL  QQDTGQRHQS  WTAVPD756

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help