Information for CAZyme ID: BAF39986.1
Basic Information
GenBank ID | BAF39986.1 |
Family | GH51 |
Sequence Length | 518 |
UniProt ID | A1A2Q3(100,100)![]() |
Average pLDDT? | 95.80 |
CAZy50 ID | 65153 |
CAZy50 Rep | Yes, BAF39986.1 |
Structure Cluster | SC_GH51_clus17 |
EC Number(s) | 3.2.1.55 |
Substrates(s) | arabinan |
Taxonomy
Tax ID | 367928 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Bifidobacteriales |
Family | Bifidobacteriaceae |
Genus | Bifidobacterium |
Species | Bifidobacterium adolescentis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVVCIDPNST IGRIDPKLHG QFIEFLGECI DEGLWVGEDS PIENERGYRK ATLDALRALR | 60 |
PPVIRWPGGC YADTYHWRDG VGPQSERKTT FNENFATYEL DDHSFGTDEF LRLCEMLGAE | 120 |
PWININMLSG TVAEMKDWME YCNRAQPTDL AKEREANGHK APYGVKYWGI GNEVWAGGGT | 180 |
MTPRTYLNEY RRFASAMPSF TTDVFAPTPM YAIASGPDGN KPRERVQWTQ DFFRGLAEYR | 240 |
QPNIDGYDLH FYNWNVDNDA DTPTRFDEDG WNAVIEGCLE LEDILRDQWR LMNDGLALIH | 300 |
EPEVAMDSKL AHVDLIIGEW GNWHKTAFFA RPALKQQVTM RDAITTALTL DLLQRNCDKV | 360 |
TMACNAQTIN VLNSLILTEG DRTILTPNYD VFMMYKAHRG MTALDVARND SEDSAVYTFA | 420 |
SRNEDGTQLL INLTNAHMND GAEVRLHLPC GAQVDSMETL ASEDPHDCNT VEHSDLVRTH | 480 |
AVDVDSAVSV HESAGGAELT VTLPAASVSA LHVTIRQR | 518 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.80 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MVVCIDPNST IGRIDPKLHG QFIEFLGECI DEGLWVGEDS PIENERGYRK ATLDALRALR | 60 |
PPVIRWPGGC YADTYHWRDG VGPQSERKTT FNENFATYEL DDHSFGTDEF LRLCEMLGAE | 120 |
PWININMLSG TVAEMKDWME YCNRAQPTDL AKEREANGHK APYGVKYWGI GNEVWAGGGT | 180 |
MTPRTYLNEY RRFASAMPSF TTDVFAPTPM YAIASGPDGN KPRERVQWTQ DFFRGLAEYR | 240 |
QPNIDGYDLH FYNWNVDNDA DTPTRFDEDG WNAVIEGCLE LEDILRDQWR LMNDGLALIH | 300 |
EPEVAMDSKL AHVDLIIGEW GNWHKTAFFA RPALKQQVTM RDAITTALTL DLLQRNCDKV | 360 |
TMACNAQTIN VLNSLILTEG DRTILTPNYD VFMMYKAHRG MTALDVARND SEDSAVYTFA | 420 |
SRNEDGTQLL INLTNAHMND GAEVRLHLPC GAQVDSMETL ASEDPHDCNT VEHSDLVRTH | 480 |
AVDVDSAVSV HESAGGAELT VTLPAASVSA LHVTIRQR | 518 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.