Information for CAZyme ID: AZS16513.1
Basic Information
| GenBank ID | AZS16513.1 |
| Family | GH2 |
| Sequence Length | 1029 |
| UniProt ID | A0A3S9V1U1(100,100) |
| Average pLDDT? | 95.60 |
| CAZy50 ID | 13076 |
| CAZy50 Rep | Yes, AZS16513.1 |
| Structure Cluster | SC_GH2_clus84 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2707005 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus lutimineralis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRRSYKRWED IHLSHINRKS ASASFWRYRS KKQALEMNKE ESIGYQSLDG EWEFLYLEAP | 60 |
| ELSPSGFYQI DYDSSKWDRI EVPSCWQMKG YGKMSYTDLY YLFPINPPYV PTDNPTGIYR | 120 |
| RGFHVDELAL GQRIILKFNG VDSAFDLWIN GEHAGYSKVS RLPSEFDITP YVAAGDNQIA | 180 |
| VRVYQWSDGT YLEDQDMWWL SGIFRSVELY QVPETTVEDI YVVTEFDEWY QDSELKVQIK | 240 |
| LDSCSEQEKK VRITCELLDD QGELVTEMEQ GMTFSAGATH DITLTKLISS PKQWTAETPN | 300 |
| LYSLLVTLYE GEQAVEVIPV RIGFRCVEVK DGNITVNGKV IMINGVNRHD HDPEHGRTVS | 360 |
| KERMLQDILL MKRYNINAVR TAHYPNNEIF YDLCDQYGLY VIDEADLECH GFELIGRYDW | 420 |
| LSDNKEWEQA YVDRAERMVL RDRNHASVIM WSLGNESSFG NNFVSVAQAC KRLDPTRLVH | 480 |
| YEGDRKAIVT DVYSTMYTRL EALKGIGKDD EGKKPHIMCE YGHAMGNGPG GLQEYQDVFR | 540 |
| QYKRLQGGFI WEWCDHGIQQ MDADGDTYYA YGGNFGDEPT NGNFCIDGLI YPDQTPSPAL | 600 |
| LEYKKVIEPV KTTAVDLKQG MIEIENTYQF IDLSHLQLEW KIVYDDQVLA QGKTSLETIL | 660 |
| PGEKREHLID YSIDEVLPNT DYYLNLQYKL KDGMAYAEQG HVVADAQFKL PYERTEVTVR | 720 |
| NVSGELSIVR DAVYTTISNA QFEAVFDHVY GYLHSYRRHG AAWIERGPRL TMWRAPIDND | 780 |
| MYKVDDWKKK YFLHLSSEQL MGFDVKDYGS YAEVNISTYF SALNQAFGFE STYRYTVYAD | 840 |
| GAIRLHLAGE PVIYSKEVPS MLPRLGIEMH VCQELGDVTW YGRGFGENYV DSKQASMMGV | 900 |
| YRAAVEELHT PYVYPQENGN RTDVKWFSMS DREASSLLFK SRNSCELTVH DYTTEALERA | 960 |
| KHHHELEKAS YHVVHIDDMQ TGLGSNSCGE EQLPPYKLGL RSFAIDVEWS SVVPGTEVCM | 1020 |
| SKRLYAEKE | 1029 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.60 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRRSYKRWED IHLSHINRKS ASASFWRYRS KKQALEMNKE ESIGYQSLDG EWEFLYLEAP | 60 |
| ELSPSGFYQI DYDSSKWDRI EVPSCWQMKG YGKMSYTDLY YLFPINPPYV PTDNPTGIYR | 120 |
| RGFHVDELAL GQRIILKFNG VDSAFDLWIN GEHAGYSKVS RLPSEFDITP YVAAGDNQIA | 180 |
| VRVYQWSDGT YLEDQDMWWL SGIFRSVELY QVPETTVEDI YVVTEFDEWY QDSELKVQIK | 240 |
| LDSCSEQEKK VRITCELLDD QGELVTEMEQ GMTFSAGATH DITLTKLISS PKQWTAETPN | 300 |
| LYSLLVTLYE GEQAVEVIPV RIGFRCVEVK DGNITVNGKV IMINGVNRHD HDPEHGRTVS | 360 |
| KERMLQDILL MKRYNINAVR TAHYPNNEIF YDLCDQYGLY VIDEADLECH GFELIGRYDW | 420 |
| LSDNKEWEQA YVDRAERMVL RDRNHASVIM WSLGNESSFG NNFVSVAQAC KRLDPTRLVH | 480 |
| YEGDRKAIVT DVYSTMYTRL EALKGIGKDD EGKKPHIMCE YGHAMGNGPG GLQEYQDVFR | 540 |
| QYKRLQGGFI WEWCDHGIQQ MDADGDTYYA YGGNFGDEPT NGNFCIDGLI YPDQTPSPAL | 600 |
| LEYKKVIEPV KTTAVDLKQG MIEIENTYQF IDLSHLQLEW KIVYDDQVLA QGKTSLETIL | 660 |
| PGEKREHLID YSIDEVLPNT DYYLNLQYKL KDGMAYAEQG HVVADAQFKL PYERTEVTVR | 720 |
| NVSGELSIVR DAVYTTISNA QFEAVFDHVY GYLHSYRRHG AAWIERGPRL TMWRAPIDND | 780 |
| MYKVDDWKKK YFLHLSSEQL MGFDVKDYGS YAEVNISTYF SALNQAFGFE STYRYTVYAD | 840 |
| GAIRLHLAGE PVIYSKEVPS MLPRLGIEMH VCQELGDVTW YGRGFGENYV DSKQASMMGV | 900 |
| YRAAVEELHT PYVYPQENGN RTDVKWFSMS DREASSLLFK SRNSCELTVH DYTTEALERA | 960 |
| KHHHELEKAS YHVVHIDDMQ TGLGSNSCGE EQLPPYKLGL RSFAIDVEWS SVVPGTEVCM | 1020 |
| SKRLYAEKE | 1029 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.