Information for CAZyme ID: AZB71357.1
Basic Information
| GenBank ID | AZB71357.1 |
| Family | GT47 |
| Sequence Length | 788 |
| UniProt ID | A0A3G6WWM9(100,100) |
| Average pLDDT? | 78.28 |
| CAZy50 ID | 28566 |
| CAZy50 Rep | Yes, AZB71357.1 |
| Structure Cluster | SC_GT47_clus12 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2219813 |
| Kingdom | Bacteria |
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Synechococcales |
| Family | Synechococcaceae |
| Genus | Synechococcus |
| Species | Synechococcus elongatus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MATFYLAEAE NWSFRTVWHD RFFTVLKYHP ARAEDLGQAD YIFLDADFAL ETNWPYYGAQ | 60 |
| TKAILKGDRF PTDEEILEYL FEHPVSGYGK PLVLINMNPL AKWPAIMQAL PDVLVVSHCH | 120 |
| TTENYRAGID ISFPAMPLLD RQCYPTRERS TLLSFRGANS HSVREQLQLL HQPPEIEVEL | 180 |
| IQQSYWGALN YADAPQGLSA EQQIYTELMA RSRFSAAPRG HDVFSYRLLE VMAAGAVPVV | 240 |
| LADDWVLPFS ELLDWSKFSL QVAEEQCLEL PQKLQVISTE QWQAMQQRSQ QVYQQYFYSL | 300 |
| AQQVNTLLLI LDQRSGDDPT PEVEIEAVLL DRAQQYRLSE DLVAAETCLA TLPRSPACVL | 360 |
| EQVRLVLTAQ QPETALALLD SVKVPEEERA EYYNLLGVAQ TQLGQWEAAI ATYRQGLELF | 420 |
| PLQPKLSTNL CLALRHCDRL PEALGISTAL LTEQPENVDR IQLQADTLNL SAVYDEALVL | 480 |
| YQQVLAQAPE RANAQLAIAE ILLRQGKADG WEAYEARFAA EPSLAVLAAY YPQPRWQGEE | 540 |
| LGSRSLLVWG EQGYGDQIQF SRYLWVLRDR YPQARIQFQT DAVLVPLFAE PLASLGIEVI | 600 |
| AAQVTEQVFD FQVPLLSLPR LVWPSLQEIP YSAGWLPCPL PPPQEEANRK FRVGIVWQAG | 660 |
| RRAGVQKSAT ADRRSCSLAA MLEAVQEVVQ RPDLEVVSLQ LGYEGVLPEG VMDWSDRLVD | 720 |
| FAATAQVLME LDLLVTVDTA IVHLAGAMKI PTKVLLAYPT DWRWQQDLGV SWYSSVGSCH | 780 |
| FVHLPTIS | 788 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.28 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MATFYLAEAE NWSFRTVWHD RFFTVLKYHP ARAEDLGQAD YIFLDADFAL ETNWPYYGAQ | 60 |
| TKAILKGDRF PTDEEILEYL FEHPVSGYGK PLVLINMNPL AKWPAIMQAL PDVLVVSHCH | 120 |
| TTENYRAGID ISFPAMPLLD RQCYPTRERS TLLSFRGANS HSVREQLQLL HQPPEIEVEL | 180 |
| IQQSYWGALN YADAPQGLSA EQQIYTELMA RSRFSAAPRG HDVFSYRLLE VMAAGAVPVV | 240 |
| LADDWVLPFS ELLDWSKFSL QVAEEQCLEL PQKLQVISTE QWQAMQQRSQ QVYQQYFYSL | 300 |
| AQQVNTLLLI LDQRSGDDPT PEVEIEAVLL DRAQQYRLSE DLVAAETCLA TLPRSPACVL | 360 |
| EQVRLVLTAQ QPETALALLD SVKVPEEERA EYYNLLGVAQ TQLGQWEAAI ATYRQGLELF | 420 |
| PLQPKLSTNL CLALRHCDRL PEALGISTAL LTEQPENVDR IQLQADTLNL SAVYDEALVL | 480 |
| YQQVLAQAPE RANAQLAIAE ILLRQGKADG WEAYEARFAA EPSLAVLAAY YPQPRWQGEE | 540 |
| LGSRSLLVWG EQGYGDQIQF SRYLWVLRDR YPQARIQFQT DAVLVPLFAE PLASLGIEVI | 600 |
| AAQVTEQVFD FQVPLLSLPR LVWPSLQEIP YSAGWLPCPL PPPQEEANRK FRVGIVWQAG | 660 |
| RRAGVQKSAT ADRRSCSLAA MLEAVQEVVQ RPDLEVVSLQ LGYEGVLPEG VMDWSDRLVD | 720 |
| FAATAQVLME LDLLVTVDTA IVHLAGAMKI PTKVLLAYPT DWRWQQDLGV SWYSSVGSCH | 780 |
| FVHLPTIS | 788 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.