Information for CAZyme ID: AYK06634.1
Basic Information
GenBank ID | AYK06634.1 |
Family | CE4, GH171 |
Sequence Length | 706 |
UniProt ID | A0A838XD74(98.7,100)![]() |
Average pLDDT? | 84.24 |
CAZy50 ID | 37936 |
CAZy50 Rep | Yes, AYK06634.1 |
Structure Cluster | SC_CE4_clus162, SC_GH171_clus15 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1465 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Brevibacillus |
Species | Brevibacillus laterosporus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRKGILFLTC LIMLMFVSDR NSYANPPSIR LGDDVLISKY HHLIDGKRIG LVTNQTGINS | 60 |
QGQSIIDVLA KYHNATLAAL YGPEHGIDGQ ARAGAYVESY IHKDWNIPVY SLYGKTRKPT | 120 |
ANMLKNIDVL VFDLQDIGAR SYTYISTLHD VMEAAREHKK PLIVLDRPNP LGGKIVDGPV | 180 |
QTPPYLSFVG VDELPLAHGM TIGELAQFFN RKMGVHLTII PMDYYARGMI FQDTGLKWVK | 240 |
SSPQVPNLAS VFGYLATGLG EGIGLQHSDN FKWVGAEGIH ANQLAKMLND ADLPGVVFVP | 300 |
ETKGFAGGVR LQIIDYHAFN PARTGMYVLA YANQLTSSVM KNQDKRFNSD QFDKIMGSSE | 360 |
LRKALARKAS PEELEALYAP MVNSFKMERL PYLIYEDIGK EYMGAIVDSG KKVTVEPKPD | 420 |
TTSPEPTPEP KPKPESKPEP NTTEPVTKPN PKPDVTTPVP GTETKPNLNP NPTTSGQKPD | 480 |
TTATKPVSSQ KVAHLTFDDG PSNVTVQILD VLKQHNIKAT FFVLGRNVKG NEAILRRMLA | 540 |
EGHTIGNHTH SHDYNKIYKN PQAFFTDLKQ SEAEIQKITG EKPTMIRFPG GSNNGVSKKA | 600 |
QDTTIYGANK WVMNDIVKEV KNQGYTYFDW NVSSGDARSN SYTPQEVIRN VKNGSANKHE | 660 |
VVILMHDTKA KESTLKALPQ VIADLKKQGF TFEALQPTSK TVQFLK | 706 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.24 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRKGILFLTC LIMLMFVSDR NSYANPPSIR LGDDVLISKY HHLIDGKRIG LVTNQTGINS | 60 |
QGQSIIDVLA KYHNATLAAL YGPEHGIDGQ ARAGAYVESY IHKDWNIPVY SLYGKTRKPT | 120 |
ANMLKNIDVL VFDLQDIGAR SYTYISTLHD VMEAAREHKK PLIVLDRPNP LGGKIVDGPV | 180 |
QTPPYLSFVG VDELPLAHGM TIGELAQFFN RKMGVHLTII PMDYYARGMI FQDTGLKWVK | 240 |
SSPQVPNLAS VFGYLATGLG EGIGLQHSDN FKWVGAEGIH ANQLAKMLND ADLPGVVFVP | 300 |
ETKGFAGGVR LQIIDYHAFN PARTGMYVLA YANQLTSSVM KNQDKRFNSD QFDKIMGSSE | 360 |
LRKALARKAS PEELEALYAP MVNSFKMERL PYLIYEDIGK EYMGAIVDSG KKVTVEPKPD | 420 |
TTSPEPTPEP KPKPESKPEP NTTEPVTKPN PKPDVTTPVP GTETKPNLNP NPTTSGQKPD | 480 |
TTATKPVSSQ KVAHLTFDDG PSNVTVQILD VLKQHNIKAT FFVLGRNVKG NEAILRRMLA | 540 |
EGHTIGNHTH SHDYNKIYKN PQAFFTDLKQ SEAEIQKITG EKPTMIRFPG GSNNGVSKKA | 600 |
QDTTIYGANK WVMNDIVKEV KNQGYTYFDW NVSSGDARSN SYTPQEVIRN VKNGSANKHE | 660 |
VVILMHDTKA KESTLKALPQ VIADLKKQGF TFEALQPTSK TVQFLK | 706 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.