Information for CAZyme ID: AYC36171.1
Basic Information
| GenBank ID | AYC36171.1 |
| Family | CBM32, CBM67, GH78 |
| Sequence Length | 1120 |
| UniProt ID | A0A385ZBP0(100,100) |
| Average pLDDT? | 90.09 |
| CAZy50 ID | 9824 |
| CAZy50 Rep | Yes, AYC36171.1 |
| Structure Cluster | SC_CBM32_clus18, SC_CBM32_clus36, SC_CBM67_clus2, SC_CBM67_clus4, SC_GH78_clus32 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 67304 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces griseorubiginosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSSVSRRSIL RSAIAVALAP TLGSALLPGL APAASAAVSW TAKWIWAPTS STNQWVAFRR | 60 |
| SFTLASAPSK AVTQIAADSK YWLWVNGALV VFDGQLKRGP NRTGTYYDEI DLAPYLRSGS | 120 |
| NTVALLVWYF GKQGFSHSSS GSGGLLFQSD ITTGSTTTRV VSDTSWKHTV HPGYSNNTSG | 180 |
| SQVNFRLPES NVYYDARNAA ALTAWESTGF NDSAWSAPTD FGAAGAAPWN DLVRRPVPQF | 240 |
| RYSGLKSYSN AASLPSTGQG ATAITATLPS NLQVTPYLKV DAPAGAVIGM QTDHYADGDG | 300 |
| LTGLTPGQEN NVRATYVCTG GVQEFEALAW MSGTAVKYTI PAGVTILDLK YRESGYDTDF | 360 |
| AGSFSSNEAF FDTLWGKAAR TMYVNMRDNY MDCPTRERAQ WWGDVVNQLK EGFYTFDTRS | 420 |
| HALGAKAIAQ LAAWQKPSGQ LFAPIPSTIW TAELPVQMLA SVWAFGTYHL YTGNTDAVSG | 480 |
| TYPAVKSYLN LWSLDSSGLV SHRAGDWDWE DWGSNIDARV LDNCWYYLAL GTAITLAGLS | 540 |
| GHSGDVAAWQ AKRDSIKANF DNVLWNSARN EYRSPGYNGD TDDRANGLAV VAGLAPASRH | 600 |
| RAVTEVLRSH LNASPYMEFY VLEALYLMGA ATVAEERMRN RYAAQVADPA CYTLWEIWDK | 660 |
| SGGTDNHAWN GGPLYVMSAY AAGVRPTKPG WETYDVVPQT GTLTKISTVT PTVKGDIRLD | 720 |
| ITRDGSQVTL ALTSPGATTA RVGVPTYGGS SPVIKANGTT VFTGGAATGS VSGLSYASKD | 780 |
| SAYVYFTLQP GTWTFTVTGA GRLDDLALGR PVTSNSSLEN GDWGKNRLTD GKLTSVSGAK | 840 |
| GYTSIDFPSA DVSANPVWVE IDLGADTDLD AVRLFPRTDT PAVGGGTAGF PVDFTIQTRP | 900 |
| DGSGTYTTVR TVTAEPNPGG LVQTYGFRTT TARYVRLQAT KLGTPPVDET TKYRLQLAEL | 960 |
| TVPTAATTVT ANYTLENGDW GKTRLLDGTL TSVAGSRGFT SIDFPSADVS GTPLWIEVDL | 1020 |
| GTDRAIGSVT LHPRTDTSAS GGGTAGFPVD FTFQTRTDGG TTYTTARTVT GEPNPNGAAQ | 1080 |
| TYTLTSANGR YLRLKVTRLG KPASDESTRY RLQFAEIRIK | 1120 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.09 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSSVSRRSIL RSAIAVALAP TLGSALLPGL APAASAAVSW TAKWIWAPTS STNQWVAFRR | 60 |
| SFTLASAPSK AVTQIAADSK YWLWVNGALV VFDGQLKRGP NRTGTYYDEI DLAPYLRSGS | 120 |
| NTVALLVWYF GKQGFSHSSS GSGGLLFQSD ITTGSTTTRV VSDTSWKHTV HPGYSNNTSG | 180 |
| SQVNFRLPES NVYYDARNAA ALTAWESTGF NDSAWSAPTD FGAAGAAPWN DLVRRPVPQF | 240 |
| RYSGLKSYSN AASLPSTGQG ATAITATLPS NLQVTPYLKV DAPAGAVIGM QTDHYADGDG | 300 |
| LTGLTPGQEN NVRATYVCTG GVQEFEALAW MSGTAVKYTI PAGVTILDLK YRESGYDTDF | 360 |
| AGSFSSNEAF FDTLWGKAAR TMYVNMRDNY MDCPTRERAQ WWGDVVNQLK EGFYTFDTRS | 420 |
| HALGAKAIAQ LAAWQKPSGQ LFAPIPSTIW TAELPVQMLA SVWAFGTYHL YTGNTDAVSG | 480 |
| TYPAVKSYLN LWSLDSSGLV SHRAGDWDWE DWGSNIDARV LDNCWYYLAL GTAITLAGLS | 540 |
| GHSGDVAAWQ AKRDSIKANF DNVLWNSARN EYRSPGYNGD TDDRANGLAV VAGLAPASRH | 600 |
| RAVTEVLRSH LNASPYMEFY VLEALYLMGA ATVAEERMRN RYAAQVADPA CYTLWEIWDK | 660 |
| SGGTDNHAWN GGPLYVMSAY AAGVRPTKPG WETYDVVPQT GTLTKISTVT PTVKGDIRLD | 720 |
| ITRDGSQVTL ALTSPGATTA RVGVPTYGGS SPVIKANGTT VFTGGAATGS VSGLSYASKD | 780 |
| SAYVYFTLQP GTWTFTVTGA GRLDDLALGR PVTSNSSLEN GDWGKNRLTD GKLTSVSGAK | 840 |
| GYTSIDFPSA DVSANPVWVE IDLGADTDLD AVRLFPRTDT PAVGGGTAGF PVDFTIQTRP | 900 |
| DGSGTYTTVR TVTAEPNPGG LVQTYGFRTT TARYVRLQAT KLGTPPVDET TKYRLQLAEL | 960 |
| TVPTAATTVT ANYTLENGDW GKTRLLDGTL TSVAGSRGFT SIDFPSADVS GTPLWIEVDL | 1020 |
| GTDRAIGSVT LHPRTDTSAS GGGTAGFPVD FTFQTRTDGG TTYTTARTVT GEPNPNGAAQ | 1080 |
| TYTLTSANGR YLRLKVTRLG KPASDESTRY RLQFAEIRIK | 1120 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.