Information for CAZyme ID: AXT52830.1
Basic Information
GenBank ID | AXT52830.1 |
Family | PL6_1 |
Sequence Length | 767 |
UniProt ID | A0A3A9WJ67(100,100)![]() |
Average pLDDT? | 90.71 |
CAZy50 ID | 30812 |
CAZy50 Rep | Yes, AXT52830.1 |
Structure Cluster | SC_PL6_clus22 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1714860 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | Aquimarina |
Species | Aquimarina sp. BL5 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKKSRLYSYL LAILLTVSSC TQTSTTKQTD GTNLVTTVEE FNKAIAVAQP GEEITLSNGI | 60 |
WNDVQFVITA TGTEEKPIII KAEEKGKVIL SGNTSLKIGG KHVIIKELVF KNGYTKEDAL | 120 |
IVFKTDDGKL AENCRLTEIA IDHFNPANRF DKSEWIHLHG KNNRVDHNYF GGKLNAGVTL | 180 |
VVKLNNKNSL ENRHRIDHNY FGYRPNLGSN GGETLRVGVS TYSLSPSRTL IENNYFEQCD | 240 |
GEVEIVSLKS SDNIVRNNVF YESAGVLALR HGNRNLIENN FFIGNNKPGT GGVRVINEGH | 300 |
TIRNNHFQEL KGKRFFGALP VMNGVPNSLI NRYHRAENTD ITGNKFLKCD HIQFGVGADN | 360 |
ERTDPPQDIR FTDNVFYHPE RKQVFEAISD YSTFSFSGNE VVSADSKFNH KGFTQAEITF | 420 |
SKDSADGLLK NQTYQPKLPF TKNEVGPNWY TPQKKYFDIT NKNSNAAQVS GNENDTLFTM | 480 |
VKSASSGDSI QLKPGTYTFT KPLVINKTLT IIADESDNPT IFTYDKNESQ KPLVIIENGG | 540 |
SLYVKGVIFD GASENGIAQS AIATSSKPMI EHYKLKVVSC EFKNFNASRK TAFRAYKNTY | 600 |
ADTLIFKNST FHNISGNAIS LDGENENRGR YNAEYVKIDN CHFSKVMGNA VSLLRMGNDE | 660 |
STTGPYLELK NSTFIDVNNK DLGSVVLLWG VQKLNIDNLL FINSGKGGRV IKYEDPGWAI | 720 |
STIDRISLIN SGRIESFGKR TGNNIEIIKT EKPLKYPAKY KGYKTIN | 767 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.71 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKKSRLYSYL LAILLTVSSC TQTSTTKQTD GTNLVTTVEE FNKAIAVAQP GEEITLSNGI | 60 |
WNDVQFVITA TGTEEKPIII KAEEKGKVIL SGNTSLKIGG KHVIIKELVF KNGYTKEDAL | 120 |
IVFKTDDGKL AENCRLTEIA IDHFNPANRF DKSEWIHLHG KNNRVDHNYF GGKLNAGVTL | 180 |
VVKLNNKNSL ENRHRIDHNY FGYRPNLGSN GGETLRVGVS TYSLSPSRTL IENNYFEQCD | 240 |
GEVEIVSLKS SDNIVRNNVF YESAGVLALR HGNRNLIENN FFIGNNKPGT GGVRVINEGH | 300 |
TIRNNHFQEL KGKRFFGALP VMNGVPNSLI NRYHRAENTD ITGNKFLKCD HIQFGVGADN | 360 |
ERTDPPQDIR FTDNVFYHPE RKQVFEAISD YSTFSFSGNE VVSADSKFNH KGFTQAEITF | 420 |
SKDSADGLLK NQTYQPKLPF TKNEVGPNWY TPQKKYFDIT NKNSNAAQVS GNENDTLFTM | 480 |
VKSASSGDSI QLKPGTYTFT KPLVINKTLT IIADESDNPT IFTYDKNESQ KPLVIIENGG | 540 |
SLYVKGVIFD GASENGIAQS AIATSSKPMI EHYKLKVVSC EFKNFNASRK TAFRAYKNTY | 600 |
ADTLIFKNST FHNISGNAIS LDGENENRGR YNAEYVKIDN CHFSKVMGNA VSLLRMGNDE | 660 |
STTGPYLELK NSTFIDVNNK DLGSVVLLWG VQKLNIDNLL FINSGKGGRV IKYEDPGWAI | 720 |
STIDRISLIN SGRIESFGKR TGNNIEIIKT EKPLKYPAKY KGYKTIN | 767 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.